Subcellular Localization
min:
: max
Winner_takes_all: nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70125 | Canola | cytosol | 63.17 | 97.92 |
| CDY31597 | Canola | mitochondrion | 75.67 | 88.52 |
| CDY33614 | Canola | mitochondrion, nucleus | 86.16 | 83.25 |
| CDY24501 | Canola | mitochondrion, nucleus | 90.05 | 82.82 |
| AT1G59910.1 | Thale cress | nucleus | 84.54 | 67.71 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 29.17 | 51.06 |
| CDY16239 | Canola | vacuole | 42.61 | 45.16 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.91 | 44.97 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 46.77 | 43.94 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 35.08 | 41.56 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 44.76 | 40.81 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 44.22 | 40.17 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 42.07 | 39.87 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 41.53 | 38.62 |
| CDX94358 | Canola | mitochondrion, plastid | 7.93 | 37.82 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 37.63 | 36.94 |
| KRH45763 | Soybean | endoplasmic reticulum, vacuole | 38.71 | 36.46 |
| KRG99223 | Soybean | golgi, vacuole | 37.23 | 35.79 |
| KRH69441 | Soybean | golgi, plasma membrane | 38.44 | 35.57 |
| KRH74702 | Soybean | endoplasmic reticulum | 38.58 | 35.34 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 39.25 | 32.41 |
| EES05554 | Sorghum | plasma membrane | 40.05 | 32.39 |
| TraesCS6A01G312000.2 | Wheat | plastid | 39.25 | 32.19 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 38.98 | 32.19 |
| KXG39193 | Sorghum | plastid | 36.83 | 32.16 |
| Zm00001d017983_P001 | Maize | plasma membrane | 39.11 | 31.6 |
| HORVU6Hr1G076870.4 | Barley | plastid | 39.38 | 31.27 |
| CDY37849 | Canola | endoplasmic reticulum | 19.09 | 27.05 |
| CDY22934 | Canola | nucleus, plastid | 26.08 | 26.61 |
| CDY08720 | Canola | mitochondrion | 25.0 | 25.58 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.21 | 24.47 |
| CDY43811 | Canola | golgi | 27.96 | 24.38 |
| CDY43029 | Canola | plasma membrane | 28.09 | 24.22 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 25.81 | 24.03 |
| CDY42470 | Canola | plasma membrane | 27.15 | 23.52 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 23.25 | 23.22 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 24.6 | 22.99 |
| CDY18346 | Canola | plasma membrane | 26.88 | 22.94 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 25.81 | 22.78 |
| CDY53556 | Canola | nucleus | 25.81 | 22.72 |
| CDY44259 | Canola | plasma membrane, vacuole | 25.67 | 22.66 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 25.4 | 22.5 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 23.92 | 22.42 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 26.75 | 22.06 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 23.25 | 21.54 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.52 | 21.42 |
| CDY17909 | Canola | golgi, vacuole | 24.06 | 21.11 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 18.01 | 18.79 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 17.88 | 18.42 |
| CDY28040 | Canola | plastid | 18.55 | 17.92 |
| CDY35941 | Canola | plastid | 18.01 | 17.89 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.27 | 17.75 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.54 | 17.66 |
| CDY27130 | Canola | cytosol, mitochondrion | 9.14 | 17.3 |
| CDX85333 | Canola | plasma membrane | 18.95 | 17.13 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 18.41 | 16.98 |
| CDY12361 | Canola | cytosol | 16.67 | 11.05 |
| CDX99025 | Canola | cytosol | 17.2 | 10.98 |
| CDX69994 | Canola | plastid | 16.26 | 10.19 |
| CDX76779 | Canola | cytosol | 15.05 | 10.03 |
| CDY12294 | Canola | cytosol | 15.99 | 9.76 |
| CDY49153 | Canola | cytosol | 13.71 | 9.73 |
| CDY34742 | Canola | cytosol | 14.65 | 9.71 |
| CDY14029 | Canola | cytosol | 15.99 | 9.67 |
| CDY32721 | Canola | cytosol | 15.59 | 9.32 |
| CDX69993 | Canola | cytosol | 14.92 | 9.15 |
| CDY02799 | Canola | cytosol | 15.19 | 9.03 |
| CDX99026 | Canola | cytosol | 15.32 | 8.97 |
| CDY40774 | Canola | cytosol | 11.16 | 8.92 |
| CDX78309 | Canola | nucleus | 17.88 | 8.88 |
| CDY62689 | Canola | cytosol | 15.32 | 8.82 |
| CDX81069 | Canola | nucleus | 17.07 | 8.75 |
| CDY43877 | Canola | cytosol | 12.9 | 7.28 |
| CDX99029 | Canola | cytosol | 0.13 | 6.25 |
| CDX69992 | Canola | cytosol | 6.18 | 6.08 |
| CDY02798 | Canola | cytosol | 2.28 | 3.47 |
| CDX99027 | Canola | nucleus | 3.36 | 2.9 |
Protein Annotations
| EnsemblPlants:CDY55061 | EnsemblPlantsGene:GSBRNA2T00015017001 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF239 | PFAM:PF02181 | PFscan:PS51444 | ProteinID:CDY55061 | ProteinID:CDY55061.1 |
| SEG:seg | SMART:SM00498 | SUPFAM:SSF101447 | UniParc:UPI0004EF1532 | UniProt:A0A078IXU3 | MapMan:20.2.2.6.1 |
Description
BnaCnng28150DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXU3]
Coordinates
chrLK033374:+:10848..13406
Molecular Weight (calculated)
80440.3 Da
IEP (calculated)
9.235
GRAVY (calculated)
-0.569
Length
744 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFLFRKNGS SSRRRIKEKL RGRNSDRGKR EDEERVRYEG GSDSLPPPPS PWGFLFPEDF VRIDGNLKAV IVDEEGLDVI YWKKLLELEN SGKIKKNPKP
101: RRDESIEEAF SFHVKNSQSA GGEVGDESNN GGEVSDYGKQ SQSKFQAPGG SSSPSQIPAN QITGGCGRYP PLPLPPGQLA AAIASSSTSS PPLTVNQAVP
201: NVPANQKPPP PSPPQLAGAP PPPPPPLPAK KAPAPPPPPP PPGKKAPGPP PPPPMSKTGP PKPPGHGKGP TKAAESSSAI SKTEDPAQPK LKPLHWDKVN
301: PDASHSMVWH RIDGGSFNFD GDLMEALFGY VGARKPSEAN TVPQKPTVST TQTYILDPRK SQNKAIVLKS LGMTKEEIID LLTEGHDADS DTLEKLSGIA
401: PTPEEQTEII DFSGDPTKLA DAESLLFHIL RAVPSAFNRF NVMLFKINYG SEVAQQKGSL QTLESACNEL RARGLFMKLL EAILKAGNRM NAGTARGNAQ
501: AFNLTALRKL SDVKSVDGKT TLLHFVVEEV VRSEGKRAAM SKFSGGDIAD ASREEQEIEF IKLGLPIIGG LSSEFTNVKK AAGVDYDSFI ATTLALGTRL
601: KETKRLLEQS KGKEDGCLTK LRSFFESAEE ELRVITEEQL RIMDLVKKTT NYYQAGALKE RNLFQLFVII RDFLGMVDNA CSEIARSQRK QRPAATVAGA
701: SSSTAATTPS AAAPQRNAVR FPILPPNFMS EHSRYSSSDS DSDS
101: RRDESIEEAF SFHVKNSQSA GGEVGDESNN GGEVSDYGKQ SQSKFQAPGG SSSPSQIPAN QITGGCGRYP PLPLPPGQLA AAIASSSTSS PPLTVNQAVP
201: NVPANQKPPP PSPPQLAGAP PPPPPPLPAK KAPAPPPPPP PPGKKAPGPP PPPPMSKTGP PKPPGHGKGP TKAAESSSAI SKTEDPAQPK LKPLHWDKVN
301: PDASHSMVWH RIDGGSFNFD GDLMEALFGY VGARKPSEAN TVPQKPTVST TQTYILDPRK SQNKAIVLKS LGMTKEEIID LLTEGHDADS DTLEKLSGIA
401: PTPEEQTEII DFSGDPTKLA DAESLLFHIL RAVPSAFNRF NVMLFKINYG SEVAQQKGSL QTLESACNEL RARGLFMKLL EAILKAGNRM NAGTARGNAQ
501: AFNLTALRKL SDVKSVDGKT TLLHFVVEEV VRSEGKRAAM SKFSGGDIAD ASREEQEIEF IKLGLPIIGG LSSEFTNVKK AAGVDYDSFI ATTLALGTRL
601: KETKRLLEQS KGKEDGCLTK LRSFFESAEE ELRVITEEQL RIMDLVKKTT NYYQAGALKE RNLFQLFVII RDFLGMVDNA CSEIARSQRK QRPAATVAGA
701: SSSTAATTPS AAAPQRNAVR FPILPPNFMS EHSRYSSSDS DSDS
001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
Arabidopsis Description
FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.