Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 86.76 | 86.45 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 29.66 | 56.94 |
| CDY70125 | Canola | cytosol | 33.33 | 56.67 |
| Bra035415.1-P | Field mustard | cytosol, plasma membrane, plastid | 33.33 | 55.51 |
| Bra024640.1-P | Field mustard | vacuole | 49.26 | 54.03 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 51.1 | 53.12 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 51.59 | 52.62 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 49.88 | 52.45 |
| CDY16239 | Canola | vacuole | 44.98 | 52.28 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 48.65 | 52.24 |
| Bra016233.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 50.49 | 51.37 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 33.21 | 51.13 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 38.97 | 50.64 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 48.77 | 50.25 |
| KRH74702 | Soybean | endoplasmic reticulum | 48.65 | 48.89 |
| KRH45763 | Soybean | endoplasmic reticulum, vacuole | 46.81 | 48.35 |
| KRG99223 | Soybean | golgi, vacuole | 45.34 | 47.8 |
| KRH69441 | Soybean | golgi, plasma membrane | 47.06 | 47.76 |
| VIT_17s0000g07570.t01 | Wine grape | nucleus | 49.51 | 47.59 |
| CDY31597 | Canola | mitochondrion | 36.15 | 46.38 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 42.16 | 45.38 |
| CDY55061 | Canola | mitochondrion, nucleus | 40.81 | 44.76 |
| CDY33614 | Canola | mitochondrion, nucleus | 39.46 | 41.82 |
| CDY24501 | Canola | mitochondrion, nucleus | 40.81 | 41.16 |
| Bra017889.1-P | Field mustard | nucleus | 39.46 | 40.76 |
| EES05554 | Sorghum | plasma membrane | 42.77 | 37.93 |
| Zm00001d017983_P001 | Maize | plasma membrane | 42.65 | 37.78 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 41.67 | 37.74 |
| AT1G59910.1 | Thale cress | nucleus | 42.52 | 37.35 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 41.18 | 37.29 |
| TraesCS6A01G312000.2 | Wheat | plastid | 41.3 | 37.16 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 22.43 | 36.67 |
| HORVU6Hr1G076870.4 | Barley | plastid | 41.54 | 36.18 |
| KXG39193 | Sorghum | plastid | 37.13 | 35.56 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 28.55 | 26.3 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 25.12 | 25.59 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 28.8 | 25.27 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 4.41 | 23.53 |
| VIT_14s0060g02330.t01 | Wine grape | golgi, plasma membrane, vacuole | 26.72 | 22.76 |
| VIT_11s0016g00160.t01 | Wine grape | cytosol | 16.67 | 11.79 |
| VIT_17s0000g06640.t01 | Wine grape | cytosol, mitochondrion, plasma membrane, plastid | 18.87 | 11.59 |
| VIT_02s0033g01360.t01 | Wine grape | cytosol, nucleus, plasma membrane | 18.38 | 11.48 |
| VIT_04s0008g06530.t01 | Wine grape | cytosol, nucleus, plasma membrane | 14.71 | 8.15 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | ProteinID:CCB56621 | ProteinID:CCB56621.1 | ncoils:Coil | UniProt:F6HPJ3 |
| InterPro:FH2_Formin | EMBL:FN596002 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR015425 |
| PFAM:PF02181 | PRINTS:PR01217 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF239 | SMART:SM00498 |
| SUPFAM:SSF101447 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000210856D | ArrayExpress:VIT_01s0026g00950 | EnsemblPlantsGene:VIT_01s0026g00950 |
| EnsemblPlants:VIT_01s0026g00950.t01 | SEG:seg | : | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:F6HPJ3]
Coordinates
chr1:+:9877899..9880443
Molecular Weight (calculated)
89442.2 Da
IEP (calculated)
9.902
GRAVY (calculated)
-0.527
Length
816 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAIQPWHL ISLFFVPLLS LVHLSACQPN SPRNIETFYP FQPPPNPTPD NPQISPPTPI EPPPPPLLLS PPPPPPPSSK SSSSNAVAKA VAATAASTIV
101: VAGLFFLLFQ RYTVARRRRQ KDGNDPRGGG EHVVHHTEFS RFNGNLKGLI VDENGLDVLY WKQLEGGSRK NSFRKEALHN LKDEEKRMSR NGDQRAKPEP
201: IQEIPLLRGK SSTSYDEVQE EVENLNRFSA PPPLSQSFEI SLEAVGKPES SIQPSTSPPP PPPPPPPPPP PPPPPILAIP RQPRPPPPPP PPIPAKINPT
301: PPPPPPPKAG GFTSSTKEAS SVPKGVPNGS KLGESSSGYS KAGTGNGQVA LKPLHWDKVN TNANHSMVWH KIDGGSFSFD GDLMEALFGF VATNRRSPQR
401: NHNNPNGASS SQSAQIFILD SRKSQNTAIV LRSLAISRKE ILNALIEGQD LNADTLEKLT KIAPTKEEES QILAFKGDPT RLADAESFLY HILKAVPSAF
501: DRLSAMFFRL NYDSEILHLR ECLQTLELGC KELRTRGLFL KLLEAILKAG NRMNAGTSRG NAQAFNLAAL QKLSDVKSTD GKTTLLHFVV EEVVRSEGKR
601: CVLNRNRSLS RSSSQSSSNS SLYSENSTSR EDREKEYIMI GLPVVGGLSA EFSNVKKAAV IDYNAFAGVC STLTAHSTEI KQFVAQFANS DGGFLRKMKS
701: FLKASDEELR EVREEQTRVM ELVRRTTEYY QPRSSKNKEA SPVQLFVIVK NFLGMVDQVC VDIARNLQRR KTTTASLGSS TKSPPSRIPV KFPNLPPNFM
801: SDKSRNSSSS DSEDEF
101: VAGLFFLLFQ RYTVARRRRQ KDGNDPRGGG EHVVHHTEFS RFNGNLKGLI VDENGLDVLY WKQLEGGSRK NSFRKEALHN LKDEEKRMSR NGDQRAKPEP
201: IQEIPLLRGK SSTSYDEVQE EVENLNRFSA PPPLSQSFEI SLEAVGKPES SIQPSTSPPP PPPPPPPPPP PPPPPILAIP RQPRPPPPPP PPIPAKINPT
301: PPPPPPPKAG GFTSSTKEAS SVPKGVPNGS KLGESSSGYS KAGTGNGQVA LKPLHWDKVN TNANHSMVWH KIDGGSFSFD GDLMEALFGF VATNRRSPQR
401: NHNNPNGASS SQSAQIFILD SRKSQNTAIV LRSLAISRKE ILNALIEGQD LNADTLEKLT KIAPTKEEES QILAFKGDPT RLADAESFLY HILKAVPSAF
501: DRLSAMFFRL NYDSEILHLR ECLQTLELGC KELRTRGLFL KLLEAILKAG NRMNAGTSRG NAQAFNLAAL QKLSDVKSTD GKTTLLHFVV EEVVRSEGKR
601: CVLNRNRSLS RSSSQSSSNS SLYSENSTSR EDREKEYIMI GLPVVGGLSA EFSNVKKAAV IDYNAFAGVC STLTAHSTEI KQFVAQFANS DGGFLRKMKS
701: FLKASDEELR EVREEQTRVM ELVRRTTEYY QPRSSKNKEA SPVQLFVIVK NFLGMVDQVC VDIARNLQRR KTTTASLGSS TKSPPSRIPV KFPNLPPNFM
801: SDKSRNSSSS DSEDEF
001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
Arabidopsis Description
FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.