CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70125	Canola	cytosol	57.11	96.25
CDY33614	Canola	mitochondrion, nucleus	88.63	93.12
CDY55061	Canola	mitochondrion, nucleus	82.82	90.05
CDY31597	Canola	mitochondrion	68.11	86.64
AT1G59910.1	Thale cress	nucleus	80.35	69.97
GSMUA_Achr6P04430_001	Banana	cytosol	26.95	51.29
CDY16239	Canola	vacuole	39.68	45.73
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.14	44.97
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	43.51	44.44
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	41.16	40.81
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	31.64	40.76
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	40.42	39.93
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	38.44	39.62
PGSC0003DMT400058304	Potato	plasma membrane	38.07	38.5
CDX94358	Canola	mitochondrion, plastid	7.29	37.82
GSMUA_Achr8P22610_001	Banana	plasma membrane	34.98	37.34
KRH45763	Soybean	endoplasmic reticulum, vacuole	35.48	36.33
KRH69441	Soybean	golgi, plasma membrane	35.85	36.07
KRH74702	Soybean	endoplasmic reticulum	35.97	35.84
KRG99223	Soybean	golgi, vacuole	34.24	35.79
EES05554	Sorghum	plasma membrane	37.21	32.72
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	35.97	32.3
TraesCS6A01G312000.2	Wheat	plastid	36.09	32.19
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	35.85	32.19
KXG39193	Sorghum	plastid	33.75	32.04
Zm00001d017983_P001	Maize	plasma membrane	36.46	32.03
HORVU6Hr1G076870.4	Barley	plastid	35.97	31.06
CDY37849	Canola	endoplasmic reticulum	17.8	27.43
CDY22934	Canola	nucleus, plastid	23.73	26.34
CDY08720	Canola	mitochondrion	23.11	25.72
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	23.86	24.22
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	23.86	24.16
CDY43811	Canola	golgi	25.46	24.15
CDY43029	Canola	plasma membrane	25.71	24.1
CDY42470	Canola	plasma membrane	25.09	23.63
CDY05170	Canola	extracellular, golgi, plasma membrane	21.76	23.62
CDY27766	Canola	golgi, plasma membrane, vacuole	22.99	23.37
CDY18346	Canola	plasma membrane	24.85	23.05
CDX83457	Canola	golgi, plasma membrane, vacuole	23.86	22.89
CDY44259	Canola	plasma membrane, vacuole	23.61	22.66
CDY43578	Canola	endoplasmic reticulum, extracellular	23.49	22.62
CDY53556	Canola	nucleus	23.49	22.49
CDX79799	Canola	mitochondrion, plastid, vacuole	21.63	22.04
CDY36494	Canola	endoplasmic reticulum, vacuole	24.47	21.95
CDX74146	Canola	extracellular, golgi, plasma membrane	21.63	21.79
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.63	21.42
CDY17909	Canola	golgi, vacuole	22.37	21.34
CDX74041	Canola	golgi, plasma membrane, plastid	16.93	19.21
CDY07990	Canola	golgi, plasma membrane, plastid	16.81	18.84
CDY35941	Canola	plastid	16.81	18.16
CDY28040	Canola	plastid	17.18	18.05
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	23.61	18.04
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	23.86	17.94
CDY27130	Canola	cytosol, mitochondrion	8.53	17.56
CDX85333	Canola	plasma membrane	17.31	17.01
CDX86310	Canola	endoplasmic reticulum, plasma membrane	16.93	16.98
CDY12361	Canola	cytosol	15.33	11.05
CDX99025	Canola	cytosol	15.33	10.63
CDX76779	Canola	cytosol	13.97	10.12
CDY49153	Canola	cytosol	13.1	10.11
CDY12294	Canola	cytosol	15.08	10.01
CDY34742	Canola	cytosol	13.6	9.8
CDX69994	Canola	plastid	14.34	9.77
CDY14029	Canola	cytosol	14.83	9.75
CDY32721	Canola	cytosol	14.09	9.16
CDY40774	Canola	cytosol	10.51	9.13
CDY02799	Canola	cytosol	13.97	9.03
CDX69993	Canola	cytosol	13.23	8.82
CDY62689	Canola	cytosol	13.84	8.67
CDX78309	Canola	nucleus	15.95	8.62
CDX81069	Canola	nucleus	15.45	8.61
CDX99026	Canola	cytosol	13.35	8.5
CDY43877	Canola	cytosol	12.11	7.44
CDX99029	Canola	cytosol	0.12	6.25
CDX69992	Canola	cytosol	4.94	5.28
CDY02798	Canola	cytosol	1.73	2.86
CDX99027	Canola	nucleus	2.72	2.55

Protein Annotations

EnsemblPlants:CDY24501	EnsemblPlantsGene:GSBRNA2T00026799001	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil
PANTHER:PTHR23213	PANTHER:PTHR23213:SF239	PFAM:PF02181	PFscan:PS51444	ProteinID:CDY24501	ProteinID:CDY24501.1
SEG:seg	SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI0004EE6197	UniProt:A0A078GGJ3	MapMan:20.2.2.6.1

Description

BnaA01g22050DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGJ3]

Coordinates

chrLK032160:-:80300..82816

Molecular Weight (calculated)

86549.2 Da

IEP (calculated)

9.301

GRAVY (calculated)

-0.588

Length

809 amino acids

Sequence
(BLAST)

001: MSFLFRKNGS SSRRRIKDKL RGRNSDRGKR GEEEEERVRY DSVPAPPSPW GFLFPEDFVR IDGNLKAVIV DEEGLDVIYW KKLLELESSG KTPKPRRRGK
101: PDGGSRRTGA DEEEEEGGSG TNPKGDESIE EAFSFHVKKN KSSSSGSEIG DQSKSVEGGG GGRYSYTSSS SSTGGFSDYG KQSHSKFQAP GGAGGGGSGR
201: YPPLPLPPGQ LGLATASSST MPPPLTVNHG SFPTGGGGGS GLSPAISLPP GQFPAPIGSS STSPLPLTVN QTVPHVQANQ PPPPPGAPPP PPPPIPAKKA
301: PPPPPPPGKK APGPPPPPPM SKTVPPKPPG NGKGPTKSAE GSSAITKEDP AQPKLKPLHW DKVNPDASHS MVWHRIDGGS FNFDGDLMEA LFGYVGARKP
401: GEANTVPQKP TVSTTQTYIL DPRKSQNKAI VLKSLGMTKE EIIDLLTEGH DADTDTLEKL SGIAPTPEEQ TEIIDFSGDP TKLADAESLL FHILRAVPSA
501: FNRFNVMLFK INYGSEVAQQ KGSLQTLESA CNELRARGLF MKLLEAILKA GNRMNAGTAR GNAQAFNLTA LRKLSDVKSV DGKTTLLHFV VEEVVRSEGK
601: RAAMSKFSGG DIADASREEQ EIEFIKLGLP IIGGLSSEFT NVKKAAGIDY DSFLATTLAL GTRLKETKRL LDQSKGKEDG CLTKLRSFFE SAEEELRVIT
701: EEQLRIMDLV KKTTNYYQAG GALKERNLFQ LFVIIRDFLG MVDTACSEIA RNQRKQRPAA TVAGASSSTA ATTPSAAAPQ RNAVRFPILP PNFMSEHSRY
801: SSSDSDSDS

Best Arabidopsis Sequence Match ( AT1G59910.1 )
(BLAST)

001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES

Arabidopsis Description

FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.