Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44259 | Canola | plasma membrane, vacuole | 92.05 | 92.05 |
| Bra000328.1-P | Field mustard | golgi, plasma membrane, vacuole | 97.51 | 91.84 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 77.94 | 73.49 |
| CDY17909 | Canola | golgi, vacuole | 73.67 | 73.23 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 68.33 | 72.54 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 29.18 | 57.21 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 28.23 | 54.21 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 34.64 | 51.87 |
| Os01t0897700-01 | Rice | cytosol | 14.71 | 50.82 |
| CDX94358 | Canola | mitochondrion, plastid | 8.54 | 46.15 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 49.82 | 45.16 |
| PGSC0003DMT400064911 | Potato | endoplasmic reticulum, plasma membrane | 40.09 | 44.77 |
| KRH71295 | Soybean | vacuole | 46.62 | 44.66 |
| Solyc12g019480.1.1 | Tomato | nucleus | 46.86 | 44.48 |
| PGSC0003DMT400013717 | Potato | plastid | 45.31 | 44.37 |
| Solyc08g014430.2.1 | Tomato | nucleus | 39.62 | 44.12 |
| KRH50174 | Soybean | vacuole | 46.26 | 43.53 |
| GSMUA_Achr10P... | Banana | plastid | 40.93 | 42.96 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 33.93 | 42.62 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 35.71 | 41.63 |
| CDY37849 | Canola | endoplasmic reticulum | 25.62 | 41.14 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 37.49 | 40.1 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 37.37 | 40.03 |
| TraesCS5A01G304700.1 | Wheat | golgi | 37.25 | 39.9 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 37.01 | 39.69 |
| Zm00001d021173_P001 | Maize | plasma membrane | 35.82 | 39.63 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 39.38 | 39.57 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 42.59 | 38.19 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 42.94 | 38.07 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 42.82 | 37.76 |
| CDY08720 | Canola | mitochondrion | 32.5 | 37.69 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 47.33 | 37.68 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 47.81 | 37.45 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 37.25 | 36.94 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 41.52 | 36.88 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 36.65 | 36.7 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 36.54 | 36.67 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 41.4 | 36.58 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 41.16 | 36.49 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 41.16 | 36.45 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 38.08 | 35.59 |
| TraesCS1D01G010200.1 | Wheat | plastid | 23.49 | 34.86 |
| TraesCS1B01G059400.1 | Wheat | plastid | 23.01 | 34.46 |
| CDY70125 | Canola | cytosol | 18.86 | 33.12 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 20.64 | 32.65 |
| CDY35941 | Canola | plastid | 28.59 | 32.18 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 27.05 | 31.98 |
| HORVU1Hr1G002300.8 | Barley | plastid | 27.28 | 31.77 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 27.05 | 31.58 |
| CDY28040 | Canola | plastid | 28.47 | 31.17 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 27.52 | 31.14 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 30.13 | 30.6 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 28.83 | 30.53 |
| CDY22934 | Canola | nucleus, plastid | 25.86 | 29.9 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 28.47 | 29.74 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 28.11 | 29.51 |
| CDX85333 | Canola | plasma membrane | 28.59 | 29.28 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 41.64 | 29.27 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.11 | 29.01 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.93 | 28.48 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.22 | 28.48 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.81 | 28.29 |
| CDY42470 | Canola | plasma membrane | 28.71 | 28.17 |
| CDY43029 | Canola | plasma membrane | 28.83 | 28.16 |
| CDY43811 | Canola | golgi | 28.47 | 28.14 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 27.16 | 27.96 |
| CDY18346 | Canola | plasma membrane | 28.83 | 27.87 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 27.4 | 27.53 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 20.05 | 26.91 |
| CDY53556 | Canola | nucleus | 26.93 | 26.86 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 25.03 | 26.64 |
| CDY16239 | Canola | vacuole | 22.06 | 26.5 |
| CDY31597 | Canola | mitochondrion | 19.93 | 26.42 |
| CDY55061 | Canola | mitochondrion, nucleus | 22.78 | 25.81 |
| CDY33614 | Canola | mitochondrion, nucleus | 22.42 | 24.55 |
| CDY24501 | Canola | mitochondrion, nucleus | 22.89 | 23.86 |
| CDY27130 | Canola | cytosol, mitochondrion | 8.9 | 19.08 |
| Zm00001d035757_P003 | Maize | plasma membrane | 27.05 | 13.55 |
| CDY40774 | Canola | cytosol | 14.71 | 13.32 |
| CDY12361 | Canola | cytosol | 17.32 | 13.01 |
| CDX99025 | Canola | cytosol | 17.79 | 12.86 |
| CDX76779 | Canola | cytosol | 16.73 | 12.62 |
| CDX99029 | Canola | cytosol | 0.24 | 12.5 |
| CDY34742 | Canola | cytosol | 16.61 | 12.47 |
| CDY14029 | Canola | cytosol | 18.15 | 12.43 |
| CDY49153 | Canola | cytosol | 15.42 | 12.4 |
| CDX69994 | Canola | plastid | 16.96 | 12.05 |
| CDY12294 | Canola | cytosol | 16.84 | 11.65 |
| CDY32721 | Canola | cytosol | 16.49 | 11.17 |
| CDY02799 | Canola | cytosol | 16.25 | 10.95 |
| CDY62689 | Canola | cytosol | 16.49 | 10.76 |
| CDX81069 | Canola | nucleus | 17.79 | 10.33 |
| CDX69993 | Canola | cytosol | 14.83 | 10.3 |
| CDX78309 | Canola | nucleus | 18.15 | 10.22 |
| CDY43877 | Canola | cytosol | 15.3 | 9.79 |
| CDX99026 | Canola | cytosol | 14.71 | 9.76 |
| CDY02798 | Canola | cytosol | 4.15 | 7.14 |
| CDX69992 | Canola | cytosol | 6.29 | 7.0 |
| CDX99027 | Canola | nucleus | 4.39 | 4.29 |
Protein Annotations
| EnsemblPlants:CDX83457 | EnsemblPlantsGene:GSBRNA2T00139035001 | Gene3D:1.20.58.2220 | GO:A0A078D2V0 | InterPro:FH2_Formin | InterPro:IPR015425 |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | PFAM:PF02181 | PFscan:PS51444 | ProteinID:CDX83457 | ProteinID:CDX83457.1 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI0004EE7C18 |
| MapMan:20.2.2.6.1 | : | : | : | : | : |
Description
BnaA03g20490D
Coordinates
chrLK031832:-:1624456..1627285
Molecular Weight (calculated)
92871.4 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.443
Length
843 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKIPFLLRL AVIVFFIFSS YSSGDQRLNS RHLLHQPFYP IVTAAPPPLS SKPPSPSPDK HHHHKKHPAA APPPQDKHLF SSVTPPPPPP APHSNPFFPS
101: NAVHPSPPPP PPASIPTFPA NISSLFFPPH NSSKPHTNNH HVAKLVSITV SVVSSSVLLS LLVVLILYLR RTRRRRLPAY NTKSTRSDSL QLFNASPSDG
201: ARKHKQPHKH TSSNTSSDFL YLGTLVNSPS SSSSSSYSRN QRPGSPELRP LPPLPKLPAF SPTYLSPEHL FPKRQDFDGE DEEFFSPRGS SGRKQSPTRV
301: VEDSGVVQSG DRSVNGSNSC SPTSFNDSPA TSLKPKSLSP LSLHSETSSN GSVLKKTGPA RPPPPPPPPP PPQFSEIPAA TSPSPPSDPD KKEETLKPKL
401: KALHWDKVRA SSSRVMVWDQ IKSNSFQVNE EMIETLFRAN DPSSRARAVG NAGVVQSVNQ ENQFLDPRKS HNIEILLRAL NVTADEVCEA LVEGNADMLG
501: PELLECLLKM APTKEEEDKL KELKDDDEST TSKIGPAEKF LRALLNIPLA FKRIDAMLYI VNFDSETEYL KRSFHTLEVA CSELKNTRMF LKLLEAVLKT
601: GNRMNIGTNR GDAHAFKLDT LLKLVDIKGA DGKTTLLHFV VQEIIKSEGA RVSSTSIQSP IGDDDIAEQS AFQDDIELKK LGLQVVSGLS SELINVKKAA
701: AMDSISLSKE IAEISSGITK VKEVIMELKQ ETGVERFLES MNSFLDKGEK VITEIQSHGI NVMKMVKEVT EYFHGNLESH PFRIFTVVRD FLTILDQVCK
801: EVGRVNERTV YGSRPSPSNQ TVTPLFPVVN INHAELSHDD DSF
101: NAVHPSPPPP PPASIPTFPA NISSLFFPPH NSSKPHTNNH HVAKLVSITV SVVSSSVLLS LLVVLILYLR RTRRRRLPAY NTKSTRSDSL QLFNASPSDG
201: ARKHKQPHKH TSSNTSSDFL YLGTLVNSPS SSSSSSYSRN QRPGSPELRP LPPLPKLPAF SPTYLSPEHL FPKRQDFDGE DEEFFSPRGS SGRKQSPTRV
301: VEDSGVVQSG DRSVNGSNSC SPTSFNDSPA TSLKPKSLSP LSLHSETSSN GSVLKKTGPA RPPPPPPPPP PPQFSEIPAA TSPSPPSDPD KKEETLKPKL
401: KALHWDKVRA SSSRVMVWDQ IKSNSFQVNE EMIETLFRAN DPSSRARAVG NAGVVQSVNQ ENQFLDPRKS HNIEILLRAL NVTADEVCEA LVEGNADMLG
501: PELLECLLKM APTKEEEDKL KELKDDDEST TSKIGPAEKF LRALLNIPLA FKRIDAMLYI VNFDSETEYL KRSFHTLEVA CSELKNTRMF LKLLEAVLKT
601: GNRMNIGTNR GDAHAFKLDT LLKLVDIKGA DGKTTLLHFV VQEIIKSEGA RVSSTSIQSP IGDDDIAEQS AFQDDIELKK LGLQVVSGLS SELINVKKAA
701: AMDSISLSKE IAEISSGITK VKEVIMELKQ ETGVERFLES MNSFLDKGEK VITEIQSHGI NVMKMVKEVT EYFHGNLESH PFRIFTVVRD FLTILDQVCK
801: EVGRVNERTV YGSRPSPSNQ TVTPLFPVVN INHAELSHDD DSF
001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
Arabidopsis Description
FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.