Factsheet for TraesCS5B01G305100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	82.21	96.42
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	96.06	96.18
TraesCS5A01G304700.1	Wheat	golgi	95.04	95.04
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	75.1	75.0
Zm00001d021173_P001	Maize	plasma membrane	68.87	71.13
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	74.08	68.59
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	71.03	66.39
PGSC0003DMT400056393	Potato	cytosol	33.16	54.38
VIT_00s0227g00200.t01	Wine grape	cytosol	9.91	50.98
Bra029655.1-P	Field mustard	cytosol	18.04	46.86
Bra012246.1-P	Field mustard	cytosol	11.05	44.39
AT3G25493.1	Thale cress	vacuole	8.64	42.5
Bra001256.1-P	Field mustard	plastid	20.33	41.99
CDX79799	Canola	mitochondrion, plastid, vacuole	40.53	40.18
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	37.74	39.34
Solyc12g019480.1.1	Tomato	nucleus	43.84	38.85
KRH47952	Soybean	cytosol	38.25	38.79
VIT_05s0094g00920.t01	Wine grape	nucleus	45.49	38.49
PGSC0003DMT400013717	Potato	plastid	42.06	38.44
Solyc08g014430.2.1	Tomato	nucleus	36.72	38.18
CDY17909	Canola	golgi, vacuole	40.91	37.97
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	41.3	37.92
KRH71295	Soybean	vacuole	41.93	37.5
CDX83457	Canola	golgi, plasma membrane, vacuole	40.03	37.37
KRH50174	Soybean	vacuole	41.93	36.83
CDY44259	Canola	plasma membrane, vacuole	38.88	36.3
TraesCS2B01G213200.1	Wheat	plasma membrane	35.96	36.14
TraesCS3B01G429900.1	Wheat	plasma membrane	43.46	35.85
Solyc06g082910.2.1	Tomato	extracellular	42.57	35.79
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	40.91	35.42
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	40.15	35.35
TraesCS4B01G257800.1	Wheat	plasma membrane	40.03	35.27
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	42.19	35.17
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	39.77	34.97
TraesCS1B01G059400.1	Wheat	plastid	24.4	34.1
TraesCS1B01G340800.1	Wheat	mitochondrion	35.07	33.09
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	45.24	32.99
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.35	32.96
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	43.71	32.73
KRH00989	Soybean	extracellular, golgi, vacuole	43.2	32.72
KRH40232	Soybean	endoplasmic reticulum, extracellular	42.95	32.59
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.47	32.53
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.6	32.17
CDX74041	Canola	golgi, plasma membrane, plastid	27.32	30.15
CDY07990	Canola	golgi, plasma membrane, plastid	27.32	29.78
CDY35941	Canola	plastid	27.95	29.37
AT5G48360.1	Thale cress	extracellular, vacuole	28.97	29.16
CDY28040	Canola	plastid	28.08	28.7
CDX85333	Canola	plasma membrane	29.99	28.68
CDX86310	Canola	endoplasmic reticulum, plasma membrane	29.1	28.38
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.84	28.13
TraesCS2B01G344200.1	Wheat	golgi	29.86	28.08
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	28.72	26.94
AT3G07540.1	Thale cress	plasma membrane	28.46	26.64
TraesCS6B01G163200.1	Wheat	plasma membrane	27.06	25.24
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	27.7	24.2
TraesCS2B01G239500.1	Wheat	plasma membrane	28.46	23.8
TraesCS2B01G209600.1	Wheat	cytosol	11.18	21.57
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	28.59	21.47
TraesCS2B01G406800.1	Wheat	cytosol	16.77	14.16
TraesCS1B01G094200.1	Wheat	cytosol	21.6	12.12
TraesCS6B01G389300.1	Wheat	cytosol	18.42	10.85
TraesCS4B01G236500.1	Wheat	mitochondrion	10.04	8.77
TraesCS2B01G209500.1	Wheat	cytosol	2.8	6.2
TraesCS7B01G051900.1	Wheat	mitochondrion	4.7	6.13

Protein Annotations

EnsemblPlants:TraesCS5B01G305100.1	EnsemblPlantsGene:TraesCS5B01G305100	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213
PANTHER:PTHR23213:SF261	PFAM:PF02181	PFscan:PS51444	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498
SUPFAM:SSF101447	TMHMM:TMhelix	MapMan:20.2.2.6.1	:	:	:

Description

No Description!

Coordinates

chr5B:+:489278831..489281765

Molecular Weight (calculated)

84523.4 Da

IEP (calculated)

9.776

GRAVY (calculated)

-0.318

Length

787 amino acids

Sequence
(BLAST)

001: MPMSMPARRR LLVLVLLHVL FLLPASSSAS LHRRRDGSHH QWHGGRRALH EPLFPLESAP ALPPPPPAPF FPFLPDAAPP RPPTVANPAP AAVGVGDVGA
101: GGDPSSSSLP NPTAPANMSS LALPVPRSAP APLRAFLSSH RLLTVLLLVA AVASAVLAAA LIYLLARRRR GRPEPEPEAY EKPALPKPSP VKPALHDDDQ
201: HPRGSTATIS STSSPELRPM PPLPRQFQQQ ARMSPLSSPI LEDRIGGTRA PPVGVPPPAP PPPPPPPMPP SKGNGSAQAA PAPPTPPPLL PRAGNGSGWL
301: PRRLSERPAP TVIRASAGAV HPEESPQSEE KDVDSGAAAL PKLKPLHWDK FRASSGRPTV WDQLKASSFR VNEEMIETLF VSNSTRRMPK NGFKEANGAP
401: CNQENKVLDA KKSQNIAIML RALDATKEEV CKALLDGQAD SLGTELLEML LKMAPTREEE LKLREYREDA QSKLGPAESF LKAVLGIPFA FKRAEAMLYI
501: ANFDSEVDYL KTAFKTLEAA CEELRGSRLF HKILDAVLKT GNRMNTGTNR GNAHAFKLDS LLKLVDIKGT DGKTTLLHFV IEEITKSEGA NIVATSQTKD
601: KVGAVADDFQ CKKVGLKIVA SLGGELGNVK KAAGMDSDSL ASCVSKLSAG VSKISDVLQL NQQLGSDERC KRFRASIGEF LQKAEAEITA VQAQEGLALS
701: LVRETTEFFH GNFAKEEGHP LRIFMVVRDF LAVLDRVCKD VSRLNERTAT GGFSTSRRVE SAAVPPRFNP AAQSSSSEEE SSSSSSQ

Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Arabidopsis Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.