Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 95.83 | 95.02 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 11.11 | 67.97 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 64.96 | 66.89 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 30.23 | 65.81 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 36.65 | 60.92 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 28.21 | 60.14 |
| Os01t0897700-01 | Rice | cytosol | 15.49 | 59.43 |
| KRH47952 | Soybean | cytosol | 45.51 | 54.9 |
| AT3G25493.1 | Thale cress | vacuole | 9.19 | 53.75 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 57.48 | 49.86 |
| Bra029655.1-P | Field mustard | cytosol | 15.92 | 49.17 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 54.91 | 48.54 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 55.45 | 48.23 |
| GSMUA_Achr10P... | Banana | plastid | 41.03 | 47.82 |
| Bra013217.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 55.66 | 47.75 |
| Solyc12g019480.1.1 | Tomato | nucleus | 45.3 | 47.75 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 53.53 | 47.67 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 52.14 | 46.97 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 36.0 | 46.61 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 51.5 | 46.48 |
| Bra012246.1-P | Field mustard | cytosol | 9.72 | 46.43 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 46.37 | 46.17 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 46.9 | 45.92 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 32.91 | 45.9 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 46.58 | 45.85 |
| Bra001256.1-P | Field mustard | plastid | 18.16 | 44.62 |
| Solyc08g014430.2.1 | Tomato | nucleus | 36.0 | 44.52 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 44.77 | 44.06 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 44.55 | 43.94 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 44.77 | 43.92 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 39.1 | 43.62 |
| Zm00001d021173_P001 | Maize | plasma membrane | 35.36 | 43.44 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 36.54 | 43.4 |
| TraesCS5A01G304700.1 | Wheat | golgi | 36.11 | 42.95 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 35.79 | 42.62 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 35.79 | 42.57 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 42.41 | 41.7 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 36.86 | 40.97 |
| Solyc02g092470.2.1 | Tomato | nucleus | 38.68 | 40.72 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 36.86 | 40.59 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 36.32 | 39.22 |
| TraesCS1D01G010200.1 | Wheat | plastid | 23.5 | 38.73 |
| TraesCS1B01G059400.1 | Wheat | plastid | 22.97 | 38.19 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 20.51 | 36.02 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 29.49 | 35.29 |
| CDY35941 | Canola | plastid | 28.1 | 35.11 |
| CDX85333 | Canola | plasma membrane | 30.77 | 34.99 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 30.13 | 34.94 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 26.6 | 34.92 |
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 30.02 | 34.82 |
| CDY28040 | Canola | plastid | 28.1 | 34.16 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 26.18 | 33.93 |
| HORVU1Hr1G002300.8 | Barley | plastid | 25.96 | 33.56 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 42.52 | 33.19 |
| AT3G07540.1 | Thale cress | plasma membrane | 28.74 | 31.99 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 27.14 | 30.6 |
| Solyc01g099650.2.1 | Tomato | nucleus | 29.49 | 30.56 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 26.18 | 29.2 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 25.11 | 28.69 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 24.04 | 28.66 |
| Solyc10g006540.2.1 | Tomato | extracellular | 28.42 | 28.51 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 27.46 | 28.0 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 22.22 | 27.77 |
| Solyc07g064010.2.1 | Tomato | golgi | 26.07 | 27.45 |
| Solyc07g052730.2.1 | Tomato | golgi | 27.24 | 26.7 |
| Solyc03g115680.2.1 | Tomato | plastid | 12.61 | 22.69 |
| Solyc08g075650.2.1 | Tomato | cytosol | 9.4 | 21.67 |
| Solyc07g005480.2.1 | Tomato | vacuole | 14.32 | 15.16 |
| Zm00001d035757_P003 | Maize | plasma membrane | 25.43 | 14.14 |
| Solyc06g069670.2.1 | Tomato | nucleus | 12.39 | 12.55 |
| Solyc12g010110.1.1 | Tomato | cytosol | 16.56 | 11.93 |
| Solyc07g005500.2.1 | Tomato | cytosol | 4.49 | 7.59 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 2.67 | 7.35 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 3.53 | 7.14 |
| Solyc08g075670.1.1 | Tomato | cytosol | 3.42 | 6.4 |
Protein Annotations
| EnsemblPlants:Solyc06g082910.2.1 | EnsemblPlantsGene:Solyc06g082910.2 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | PFAM:PF02181 | PFscan:PS51444 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI0002765BD4 |
| UniProt:K4CAE6 | MapMan:20.2.2.6.1 | : | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4CAE6]
Coordinates
chr6:+:48542531..48546385
Molecular Weight (calculated)
102394.0 Da
IEP (calculated)
6.838
GRAVY (calculated)
-0.446
Length
936 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVSVFFIFF LCFSPHLSFA TVAGNNRRVL HEPFFPLDSP SPSSQPPIPS PPAPTEYPFQ GSTTPPDNSD NNPFFPTYPS PPPPPDSPAD FVPANVSSII
101: LPNTSKSNPV SSKLIVTAII SVIAAVIVLS IAIFLHTRKR RKQSYRKTQR SDSNSNGLSR DGAKNDANNS IPKLQRPSQT SSEFLYLGTL ASSHGGIETH
201: NAQNRNGSNT SSAPSSRKMD SPELRPLPPL HGRNLRQSYG NTRFFSGTAE NDVDFYSSAG SMGGRESSIG GDSLSRRDFS AVEVERFVGC SSSSSSSSSS
301: SGSGSPARSV SLSISPPASL SPERKNLRPK SPELVAVDTA PPPQYPPPPP PPPATIVPPF AESPSPSPSP PCPLSPERYS TRSMDSSPGI FNLLDQDVQF
401: PATIRNHIQQ ATPALGPPPP RPPPPPPPPS KNIESPKTPS PRLSKPAFNP PVLESPLKPI GIESPVLVSP MELPSVSEHI EKDDERTEEP KPKLKTLHWD
501: KVRASSDREM VWDQLKSSSF KLNEEMIETL FVVKTPTLNA NDTTRRLVPS PSQENRVLDP KKAQNIAILL RAINVTTEEI CEALLEGNAE TIGSELLEIL
601: LKMAPSKEEE RKLKEYKDDS PVKLGPAEKF LKAVLDVPFA FKRVDAMLYI SNFDYEVDYL RKSFETLEAA CEELRSSRMF LKLLEAVLKT GNRMNVGTNR
701: GDAHAFKLDT LLKLVDVKGA DGKTTLLHFV VQEIIKGEGT RLSGGNQNEQ CTTNDDAKCR KLGLQVVSNI TSELMNVKNA AAMDSEVLHS DVLKLSKGIG
801: NIAEVAGYIE AVGSEESSTK KFSESMNRFM EIAEEKIIRL QAQEALAMSL VKEITEYFHG DSAREEAHPL RTFMVVKDFL MILDRVCKEV GMINERTVVS
901: SAHKFPVPVN PNLQPVTSIY TAKRQHSSSD DEYLSS
101: LPNTSKSNPV SSKLIVTAII SVIAAVIVLS IAIFLHTRKR RKQSYRKTQR SDSNSNGLSR DGAKNDANNS IPKLQRPSQT SSEFLYLGTL ASSHGGIETH
201: NAQNRNGSNT SSAPSSRKMD SPELRPLPPL HGRNLRQSYG NTRFFSGTAE NDVDFYSSAG SMGGRESSIG GDSLSRRDFS AVEVERFVGC SSSSSSSSSS
301: SGSGSPARSV SLSISPPASL SPERKNLRPK SPELVAVDTA PPPQYPPPPP PPPATIVPPF AESPSPSPSP PCPLSPERYS TRSMDSSPGI FNLLDQDVQF
401: PATIRNHIQQ ATPALGPPPP RPPPPPPPPS KNIESPKTPS PRLSKPAFNP PVLESPLKPI GIESPVLVSP MELPSVSEHI EKDDERTEEP KPKLKTLHWD
501: KVRASSDREM VWDQLKSSSF KLNEEMIETL FVVKTPTLNA NDTTRRLVPS PSQENRVLDP KKAQNIAILL RAINVTTEEI CEALLEGNAE TIGSELLEIL
601: LKMAPSKEEE RKLKEYKDDS PVKLGPAEKF LKAVLDVPFA FKRVDAMLYI SNFDYEVDYL RKSFETLEAA CEELRSSRMF LKLLEAVLKT GNRMNVGTNR
701: GDAHAFKLDT LLKLVDVKGA DGKTTLLHFV VQEIIKGEGT RLSGGNQNEQ CTTNDDAKCR KLGLQVVSNI TSELMNVKNA AAMDSEVLHS DVLKLSKGIG
801: NIAEVAGYIE AVGSEESSTK KFSESMNRFM EIAEEKIIRL QAQEALAMSL VKEITEYFHG DSAREEAHPL RTFMVVKDFL MILDRVCKEV GMINERTVVS
901: SAHKFPVPVN PNLQPVTSIY TAKRQHSSSD DEYLSS
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.