Factsheet for Solyc06g069660.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	82.94	61.04
TraesCS2D01G190700.1	Wheat	cytosol	61.47	58.87
TraesCS2A01G182900.1	Wheat	cytosol, golgi, nucleus	61.47	58.87
TraesCS2B01G209500.1	Wheat	cytosol	61.18	58.59
Zm00001d017027_P001	Maize	cytosol	35.59	50.63
AT3G32420.1	Thale cress	cytosol	15.59	49.53
Solyc07g005500.2.1	Tomato	cytosol	65.0	39.96
Solyc08g075670.1.1	Tomato	cytosol	55.0	37.4
CDX69992	Canola	cytosol	67.35	30.25
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	70.0	25.56
CDX99027	Canola	nucleus	56.76	22.36
Bra009307.1-P	Field mustard	cytosol	48.82	20.57
HORVU2Hr1G034470.10	Barley	cytosol	61.76	18.1
Solyc12g010110.1.1	Tomato	cytosol	61.18	16.01
Solyc05g046120.2.1	Tomato	plasma membrane	9.12	3.38
Solyc07g052730.2.1	Tomato	golgi	8.24	2.93
Solyc12g019480.1.1	Tomato	nucleus	7.65	2.93
Solyc08g014430.2.1	Tomato	nucleus	6.47	2.91
Solyc10g006540.2.1	Tomato	extracellular	7.94	2.89
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	7.06	2.77
Solyc06g082910.2.1	Tomato	extracellular	7.35	2.67
Solyc02g092470.2.1	Tomato	nucleus	6.76	2.59
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	5.88	2.55
Solyc01g099650.2.1	Tomato	nucleus	6.76	2.55
Solyc07g064010.2.1	Tomato	golgi	5.0	1.91
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	5.0	1.87
Solyc03g113710.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	3.24	1.47
Solyc07g005480.2.1	Tomato	vacuole	2.94	1.13
TraesCS2A01G183000.1	Wheat	cytosol	1.18	0.98
TraesCS2B01G209600.1	Wheat	cytosol	1.18	0.98
TraesCS2D01G190800.1	Wheat	cytosol	1.18	0.98
Solyc03g115680.2.1	Tomato	plastid	0.88	0.58
Solyc08g075650.2.1	Tomato	cytosol	0.59	0.49
Solyc06g069670.2.1	Tomato	nucleus	0.88	0.32

Protein Annotations

EnsemblPlants:Solyc06g069660.1.1	EnsemblPlantsGene:Solyc06g069660.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	InterPro:IPR014020	InterPro:IPR029021
InterPro:IPR029023	InterPro:Prot-tyrosine_phosphatase-like	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271
PFAM:PF10409	PFscan:PS51181	PFscan:PS51182	SEG:seg	SMART:SM01326	SUPFAM:SSF49562
SUPFAM:SSF52799	UniParc:UPI0002766B5E	UniProt:K4C8D9	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6:+:43385400..43387165

Molecular Weight (calculated)

39981.5 Da

IEP (calculated)

6.836

GRAVY (calculated)

-0.206

Length

340 amino acids

Sequence
(BLAST)

001: MALFRRFFYR KPPDRLLEIS ERVYVFDCCF STDALDKYEY KTYMGGIVAQ LQDHYPDASF MVFNFKEGDH RSQISDILTQ YDMTVMDYPR KYEGCPVLPL
101: EMIKHFLRSS ESWLSIEGQQ NVLLMHCERG GWPVLAFMLA GLLLYREQYT GEQKTLDMVY RQAPKELLYV LSPLNPQPSQ LRYLHYITRR NIGLDWLPSD
201: IPFALDCIIL RVLPQFDGGR GCRLMVRAYG LDPASPTSNR SSKLLFSTSK TKHHGRLYRQ EECALVKIDI HCRVQGDVVL ECIHLEDDLV REVMIFRAMF
301: HTAFIRSNVL MLTRDEVDVP WDAKDQFSRE FKAEVWYLFL

Best Arabidopsis Sequence Match ( AT5G07740.3 )
(BLAST)

0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS

Arabidopsis Description

actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.