Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 93.43 | 91.94 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 26.53 | 69.49 |
| CDY37849 | Canola | endoplasmic reticulum | 37.83 | 62.48 |
| Solyc02g092470.2.1 | Tomato | nucleus | 64.01 | 62.43 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 61.71 | 60.38 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 31.03 | 58.48 |
| CDY08720 | Canola | mitochondrion | 47.52 | 56.67 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 57.44 | 56.02 |
| KRH04437 | Soybean | plastid, vacuole | 57.09 | 56.0 |
| KRH28364 | Soybean | vacuole | 57.67 | 55.87 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 56.63 | 55.23 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 53.29 | 55.0 |
| HORVU4Hr1G069940.1 | Barley | plastid | 36.1 | 54.06 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 55.02 | 53.06 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 54.79 | 52.95 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 54.56 | 52.44 |
| Os03t0204100-01 | Rice | plasma membrane | 46.02 | 44.73 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 45.44 | 44.27 |
| Zm00001d028089_P001 | Maize | plasma membrane | 44.87 | 44.1 |
| Bra031838.1-P | Field mustard | cytosol | 22.38 | 44.09 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 44.98 | 44.02 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 45.1 | 43.78 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 45.1 | 43.59 |
| Zm00001d048142_P001 | Maize | plasma membrane | 41.98 | 42.28 |
| KXG39923 | Sorghum | mitochondrion | 45.79 | 42.19 |
| HORVU1Hr1G077850.2 | Barley | mitochondrion | 34.6 | 41.96 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 40.02 | 41.56 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 38.06 | 41.04 |
| Solyc08g014430.2.1 | Tomato | nucleus | 35.76 | 40.95 |
| Os07t0588200-01 | Rice | golgi, plasma membrane, vacuole | 36.22 | 40.57 |
| Zm00001d021985_P001 | Maize | plasma membrane | 37.02 | 40.48 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 36.33 | 40.23 |
| EER97466 | Sorghum | plasma membrane | 36.79 | 40.18 |
| TraesCS2A01G193700.1 | Wheat | golgi | 36.1 | 39.87 |
| Zm00001d032545_P001 | Maize | plasma membrane | 39.45 | 39.81 |
| KXG38231 | Sorghum | plastid | 41.41 | 39.8 |
| Solyc12g019480.1.1 | Tomato | nucleus | 40.72 | 39.75 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 38.06 | 39.57 |
| Os10t0347800-00 | Rice | cytosol, nucleus, plastid | 38.64 | 39.18 |
| HORVU2Hr1G035230.1 | Barley | golgi, plasma membrane, plastid | 35.52 | 39.14 |
| TraesCS1D01G329400.1 | Wheat | plastid | 37.49 | 38.97 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 38.64 | 36.85 |
| Solyc06g082910.2.1 | Tomato | extracellular | 39.22 | 36.32 |
| Solyc01g099650.2.1 | Tomato | nucleus | 31.95 | 30.68 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 26.41 | 29.17 |
| Solyc10g006540.2.1 | Tomato | extracellular | 30.1 | 27.97 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 29.18 | 27.56 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 23.53 | 27.24 |
| Solyc07g064010.2.1 | Tomato | golgi | 27.34 | 26.66 |
| Solyc07g052730.2.1 | Tomato | golgi | 29.07 | 26.39 |
| Solyc08g075650.2.1 | Tomato | cytosol | 10.27 | 21.92 |
| Solyc03g115680.2.1 | Tomato | plastid | 12.34 | 20.58 |
| Solyc07g005480.2.1 | Tomato | vacuole | 15.11 | 14.82 |
| Solyc06g069670.2.1 | Tomato | nucleus | 13.15 | 12.34 |
| Solyc12g010110.1.1 | Tomato | cytosol | 16.95 | 11.32 |
| Solyc07g005500.2.1 | Tomato | cytosol | 6.23 | 9.76 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 4.5 | 8.44 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 2.77 | 7.06 |
| Solyc08g075670.1.1 | Tomato | cytosol | 4.04 | 7.0 |
Protein Annotations
| EnsemblPlants:Solyc03g044060.2.1 | EnsemblPlantsGene:Solyc03g044060.2 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | PFAM:PF02181 |
| PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix |
| UniParc:UPI000276816E | UniProt:K4BG26 | MapMan:20.2.2.6.1 | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4BG26]
Coordinates
chr3:-:7877001..7880880
Molecular Weight (calculated)
96410.3 Da
IEP (calculated)
9.834
GRAVY (calculated)
-0.524
Length
867 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAHPICNFL STLLIFITIT VAEHTQIQHL IDINPLTTRR ILHQPLFPST SSSPPPPPPQ INSEPIFPTP DHPFFPEVPT VQTPDQPQQQ QQIQPNGTPV
101: SRNNSIAPQQ TSPTKKYAIA VSVGIVTLGM LSALGFYIYK HKTKHPDETQ KLVGNNSFQE ESRMPPSNFL YIGTVEPSAA SQTQTNHSIV ASPYRKLSPP
201: KKSDRYRPSP ELQPLPSLRN NPTFFNPPAI INSSEDDDET KIYKPYNITS ASSTSIMTRS NNSIPHSKRT SPRLSLSCSS PDIKRAIIVP SVKQTSPRSP
301: PPPSQLQQHK KPTLTYVPQR VKFSQPPPPP DMSRLKSPNN QLQVTSKASA PPPPPPPPPP PLSTSRALGG KVGSRITNSI ERSRPQRSFS SVKPQSSSPT
401: PRSGYVVSEK INHLEEQNGG AMLDTETIDE SKPRLKPLHW DKVRATSERA TVWDQLKSSS FQLNEDMMES LFGCNSVNSV TNEVIKKPVR PTVEKENRVL
501: DPKKSQNIAI MLRALNVTKD EVSEALLDGS AEGLGPELLE SLVKMAPTKE EEIKLRDYNG DTSKLGSAER FLKAILDIPF AFKRVEAMLY RANFDAEVKD
601: LRKSFQTLEE ASQELKNSRL FFKLLEAVLR AGNRMNVGTN RGDARAFKLE TLLKLIDIKG TDGKTTLLHF VVQEIIRSEG LSSDDNNLAN LSSNIKFKEQ
701: GLQVVAGLSR ELCNVKKAAG MDSDVLSGYV SKLEAGLVKV RSVLQFEKTG MEGKFFESMK VFLKEAEDGI VRIKAEERKA LSMVKEVTEY FHGDAAKEEA
801: HPLRIFLIVR DFLCILDSVC KDVGMMQDRT MVGAARSFRI ATTASLPILN RYNARQDRSW DDDSSSP
101: SRNNSIAPQQ TSPTKKYAIA VSVGIVTLGM LSALGFYIYK HKTKHPDETQ KLVGNNSFQE ESRMPPSNFL YIGTVEPSAA SQTQTNHSIV ASPYRKLSPP
201: KKSDRYRPSP ELQPLPSLRN NPTFFNPPAI INSSEDDDET KIYKPYNITS ASSTSIMTRS NNSIPHSKRT SPRLSLSCSS PDIKRAIIVP SVKQTSPRSP
301: PPPSQLQQHK KPTLTYVPQR VKFSQPPPPP DMSRLKSPNN QLQVTSKASA PPPPPPPPPP PLSTSRALGG KVGSRITNSI ERSRPQRSFS SVKPQSSSPT
401: PRSGYVVSEK INHLEEQNGG AMLDTETIDE SKPRLKPLHW DKVRATSERA TVWDQLKSSS FQLNEDMMES LFGCNSVNSV TNEVIKKPVR PTVEKENRVL
501: DPKKSQNIAI MLRALNVTKD EVSEALLDGS AEGLGPELLE SLVKMAPTKE EEIKLRDYNG DTSKLGSAER FLKAILDIPF AFKRVEAMLY RANFDAEVKD
601: LRKSFQTLEE ASQELKNSRL FFKLLEAVLR AGNRMNVGTN RGDARAFKLE TLLKLIDIKG TDGKTTLLHF VVQEIIRSEG LSSDDNNLAN LSSNIKFKEQ
701: GLQVVAGLSR ELCNVKKAAG MDSDVLSGYV SKLEAGLVKV RSVLQFEKTG MEGKFFESMK VFLKEAEDGI VRIKAEERKA LSMVKEVTEY FHGDAAKEEA
801: HPLRIFLIVR DFLCILDSVC KDVGMMQDRT MVGAARSFRI ATTASLPILN RYNARQDRSW DDDSSSP
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.