Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 85.45 | 76.0 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 85.03 | 72.9 |
| TraesCS1D01G329400.1 | Wheat | plastid | 84.76 | 72.66 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 29.23 | 63.14 |
| HORVU4Hr1G069940.1 | Barley | plastid | 44.06 | 54.4 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 34.13 | 53.04 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 61.12 | 52.34 |
| Zm00001d032545_P001 | Maize | plasma membrane | 60.0 | 49.94 |
| KXG38231 | Sorghum | plastid | 61.68 | 48.89 |
| Os10t0347800-00 | Rice | cytosol, nucleus, plastid | 56.92 | 47.6 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 57.9 | 46.15 |
| CDY37849 | Canola | endoplasmic reticulum | 33.57 | 45.71 |
| CDY08720 | Canola | mitochondrion | 40.56 | 39.89 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 46.15 | 37.25 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 33.57 | 35.77 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 41.96 | 35.71 |
| KRH04437 | Soybean | plastid, vacuole | 43.78 | 35.41 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 43.92 | 35.32 |
| KRH28364 | Soybean | vacuole | 43.92 | 35.08 |
| PGSC0003DMT400055250 | Potato | vacuole | 43.22 | 34.88 |
| Solyc02g092470.2.1 | Tomato | nucleus | 43.36 | 34.87 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 43.22 | 34.76 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 41.96 | 34.6 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 42.24 | 34.28 |
| Bra031838.1-P | Field mustard | cytosol | 20.84 | 33.86 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 42.24 | 33.48 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 41.82 | 33.33 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 41.82 | 33.26 |
| HORVU2Hr1G035230.1 | Barley | golgi, plasma membrane, plastid | 36.08 | 32.78 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 37.9 | 28.5 |
| HORVU1Hr1G002300.8 | Barley | plastid | 26.29 | 25.97 |
| HORVU0Hr1G015390.6 | Barley | cytosol, plasma membrane, plastid | 24.62 | 21.05 |
| HORVU6Hr1G076870.4 | Barley | plastid | 25.17 | 19.21 |
| HORVU2Hr1G043830.5 | Barley | cytosol, nucleus, plastid | 27.13 | 18.87 |
| HORVU2Hr1G092520.9 | Barley | cytosol | 11.89 | 10.05 |
| HORVU2Hr1G006690.1 | Barley | peroxisome | 9.65 | 7.9 |
| HORVU6Hr1G085030.6 | Barley | plasma membrane | 14.69 | 7.4 |
| HORVU5Hr1G020180.51 | Barley | mitochondrion | 15.66 | 5.74 |
| HORVU1Hr1G016320.4 | Barley | cytosol | 6.99 | 4.63 |
| HORVU0Hr1G019600.1 | Barley | plasma membrane | 1.54 | 3.38 |
| HORVU2Hr1G034470.10 | Barley | cytosol | 4.34 | 2.67 |
| HORVU5Hr1G123610.1 | Barley | cytosol, plastid | 0.14 | 2.5 |
| HORVU7Hr1G030310.1 | Barley | cytosol, plastid | 1.96 | 2.28 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G077850.2 | EnsemblPlantsGene:HORVU1Hr1G077850 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | PFAM:PF02181 |
| PFscan:PS51444 | SEG:seg | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI000B4747FE |
| UniProt:A0A287GCK2 | MapMan:20.2.2.6.1 | : | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287GCK2]
Coordinates
chrchr1H:+:518779427..518785792
Molecular Weight (calculated)
77029.6 Da
IEP (calculated)
9.028
GRAVY (calculated)
-0.405
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: SSPGGPAPRV HGGGGTPKAA IVVASAAAAA FLALFAFAAA FLLTGRVPRH PVQPRVPEHP GGHTHVSGSS GPSAAVAGSS TASHYRKARH ERARRGICHD
101: VDTVPSPELR PLPPLRRESD AVVGSSEEEA AYYTPGQRSA GSGGGEGRGT WTEASASSSS ARTTTASRLS LPSLTSDFFP TTPVAAAASA STAAPPPAPP
201: VQRSRRTTPG TRFSAGPASA NPPPPQPQTF NNTISMRRSL NPARAEDPSV AVRAAPVMAM MKENEEGSSM RMHGNDGARP GLKPLHREKV RGASSDESDM
301: VWGGHKSNSF QSEEDMIEVV AMNHAGAKRA GMSTQLRREE RVLDPEKEES IAILMRALNV TPDEVSDALL NGNGECLGAE HLETLVKMAP TKEEELKLRD
401: FTGESSKLGS VECFLKAVLD IPFAFKRVDA MLYRANFENE IVYLRKCFQT IEAACDDLKG SRLFLRLLEA VLRTGNKMNV GTNWGDAKAS KLDTLLKLAV
501: VKCADGKTTL LHFAVKEIAR QEDEKSGEVA ENHIQFRKHG LKVVSALSSE LGSVKKAATM DFDVLHGYVS RLETGIGKIT SVIMLEKQCR KGEGFFAAMR
601: GFLKEAEQGI KQVRHEERKA MERVKEITGY FHGNTAKEEA HPLRMFMVVR DFIAILDRVC REIGQQDRVF VGSARSFRAS ATSPSPLLSM HGQRGRDNNS
701: DEAVLLGAGN VDQEQ
101: VDTVPSPELR PLPPLRRESD AVVGSSEEEA AYYTPGQRSA GSGGGEGRGT WTEASASSSS ARTTTASRLS LPSLTSDFFP TTPVAAAASA STAAPPPAPP
201: VQRSRRTTPG TRFSAGPASA NPPPPQPQTF NNTISMRRSL NPARAEDPSV AVRAAPVMAM MKENEEGSSM RMHGNDGARP GLKPLHREKV RGASSDESDM
301: VWGGHKSNSF QSEEDMIEVV AMNHAGAKRA GMSTQLRREE RVLDPEKEES IAILMRALNV TPDEVSDALL NGNGECLGAE HLETLVKMAP TKEEELKLRD
401: FTGESSKLGS VECFLKAVLD IPFAFKRVDA MLYRANFENE IVYLRKCFQT IEAACDDLKG SRLFLRLLEA VLRTGNKMNV GTNWGDAKAS KLDTLLKLAV
501: VKCADGKTTL LHFAVKEIAR QEDEKSGEVA ENHIQFRKHG LKVVSALSSE LGSVKKAATM DFDVLHGYVS RLETGIGKIT SVIMLEKQCR KGEGFFAAMR
601: GFLKEAEQGI KQVRHEERKA MERVKEITGY FHGNTAKEEA HPLRMFMVVR DFIAILDRVC REIGQQDRVF VGSARSFRAS ATSPSPLLSM HGQRGRDNNS
701: DEAVLLGAGN VDQEQ
001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
Arabidopsis Description
FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.