CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013926_P001	Maize	extracellular, plasma membrane	84.81	91.62
Zm00001d032545_P001	Maize	plasma membrane	82.37	86.5
GSMUA_Achr7P26240_001	Banana	cytosol	25.94	70.69
HORVU1Hr1G077850.2	Barley	mitochondrion	48.89	61.68
Os10t0347800-00	Rice	cytosol, nucleus, plastid	58.2	61.4
KXG39923	Sorghum	mitochondrion	62.42	59.83
TraesCS1A01G327400.1	Wheat	plasma membrane	53.22	59.7
GSMUA_Achr4P07090_001	Banana	cytosol	29.93	58.7
TraesCS1B01G340800.1	Wheat	mitochondrion	53.44	57.79
TraesCS1D01G329400.1	Wheat	plastid	53.44	57.79
CDY37849	Canola	endoplasmic reticulum	31.26	53.71
CDY08720	Canola	mitochondrion	38.03	47.18
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	44.79	45.6
CDY43578	Canola	endoplasmic reticulum, extracellular	40.8	43.81
PGSC0003DMT400055250	Potato	vacuole	42.68	43.45
Solyc02g092470.2.1	Tomato	nucleus	42.79	43.42
KRH28364	Soybean	vacuole	42.57	42.91
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	42.24	42.86
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	42.57	42.71
KRH04437	Soybean	plastid, vacuole	41.57	42.42
CDY36494	Canola	endoplasmic reticulum, vacuole	42.13	42.13
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	41.69	41.92
PGSC0003DMT400038519	Potato	endoplasmic reticulum	40.69	41.66
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	41.02	41.62
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	39.8	41.41
EER97466	Sorghum	plasma membrane	34.7	39.42
Bra031838.1-P	Field mustard	cytosol	18.96	38.86
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	36.14	38.35
OQU88036	Sorghum	extracellular, plasma membrane	38.8	37.23
EES12298	Sorghum	plasma membrane	28.16	29.81
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	27.05	26.9
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	23.17	25.52
EES05554	Sorghum	plasma membrane	25.83	25.33
EES04559	Sorghum	plasma membrane	23.5	24.82
EES13879	Sorghum	golgi	24.94	24.78
KXG39193	Sorghum	plastid	22.39	23.71
EES10325	Sorghum	golgi	25.17	23.55
KXG25260	Sorghum	cytosol	17.41	12.98
OQU80260	Sorghum	cytosol	12.42	9.88
KXG31267	Sorghum	cytosol	16.3	9.86
OQU90190	Sorghum	cytosol	16.74	9.2
KXG23793	Sorghum	cytosol	17.29	7.74
EER87977	Sorghum	cytosol	2.99	5.03

Protein Annotations

EnsemblPlants:KXG38231	EnsemblPlantsGene:SORBI_3001G203700	Gene3D:1.20.58.2220	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF261	PFAM:PF02181
PFscan:PS51444	PRINTS:PR01217	ProteinID:KXG38231	ProteinID:KXG38231.1	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI00081ACBAA	UniProt:A0A1B6QJX9	MapMan:20.2.2.6.1	:

Description

hypothetical protein

Coordinates

chr1:+:18562654..18566508

Molecular Weight (calculated)

96009.4 Da

IEP (calculated)

8.793

GRAVY (calculated)

-0.329

Length

902 amino acids

Sequence
(BLAST)

001: MAASFLFPHA FLSPRVVFVS PCIPTPADRR SHSTAITLAP SLPLSRSSSL SLSPMSPLLT LTSLLFLVHS AAAAAGGGDT RRALHEPLFP IEWTPPPSTT
101: APPAPGFAAD PSTPVPPVDN GGPALLPAPP PPNTVAADAS SSRTGPAPRV HGGGGGGGTP KAAIVVASAA AAAVLALLAF AAAFLLTGRL ARRHPAWANK
201: PPGLAAAAHP GPASAVVLHA DAVGTSAAAA ASSSGAGATP YRKARSERAR RGMCRDVDTV PSPELRPLPP LRRAGSSDED AAYYTPGQRS AGGDGAGTWS
301: EASASSPRTT TPSRRSLPSL TSDFFPPTPA AAVPAATVAP PPPAPPAPRS RRTLPRTRFS AGSASDMIKQ MVSPPSNPPP PPPPPPPPPP PAPRCTNAIP
401: KPPQPPPGPS AAPLSTRRLH KPEQTEGPSV AAPRAPVMAV NKDNDGMSIR TDDDPAGDEA RPKLKPLHWD KVRACSDRDM VWDRLKSNSF QLDEDMIEVL
501: FTNNAANAPS RDTLKKPGAP QCSAQEKVLD PKKAQNIAIL LRALNVTLEE VSDALLDGNA ECLGADLLET LVKMAPTKEE ELKLRNFTGD LSKLGSAERF
601: LKALLDIPFS FKRVDAMLYR ANFESEINYL RKSFETLEGA CDDLKGSRLF LKLLEAVLQA GNRMNVGTNR GQAKAFKLDT LLKLADVKGT DGKTTLLHFV
701: VQEIVRSEDA KSEKAVGDEA RNIVKDEMFR KQGLKVVSGL SNELGNVKKA ASMDFDVLHS YVSKLQAGLG KIKSVLLLEK QCTQGQNFFA RMRDFLKEAE
801: IEIKQVRCDE ERALGRVKEI TEYFHGDSAK EEAHPLRIFM VVRDFLSMLD HVCKEVSQQD RSVVGSGRSF RMSATTAMAN LKMYGQHAGD DDDDDDEESW
901: SL

Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)

001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST

Arabidopsis Description

FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.