CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003406_P002	Maize	plasma membrane	88.5	89.66
Os04t0461800-01	Rice	extracellular	69.95	71.55
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	68.9	69.72
TraesCS2B01G344200.1	Wheat	golgi	68.19	69.41
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	68.54	64.32
CDY05170	Canola	extracellular, golgi, plasma membrane	37.56	42.95
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.38	42.11
CDX74146	Canola	extracellular, golgi, plasma membrane	39.44	41.84
CDY27766	Canola	golgi, plasma membrane, vacuole	38.97	41.71
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	39.55	40.95
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	39.08	40.66
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	40.26	38.8
KRG92894	Soybean	endoplasmic reticulum, vacuole	39.2	37.44
KRG96818	Soybean	plasma membrane	34.62	37.29
VIT_14s0060g02330.t01	Wine grape	golgi, plasma membrane, vacuole	41.9	37.27
KRH68527	Soybean	plasma membrane	34.15	36.6
KRH33895	Soybean	plasma membrane	39.08	36.23
PGSC0003DMT400063542	Potato	extracellular, golgi, plasma membrane	36.62	34.67
Solyc01g099650.2.1	Tomato	nucleus	36.5	34.44
EES13879	Sorghum	golgi	34.04	31.94
EER97466	Sorghum	plasma membrane	26.29	28.21
KXG38231	Sorghum	plastid	29.81	28.16
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	27.82	27.88
KXG39923	Sorghum	mitochondrion	30.28	27.42
OQU88036	Sorghum	extracellular, plasma membrane	30.16	27.34
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	25.0	23.48
EES04559	Sorghum	plasma membrane	23.36	23.3
EES05554	Sorghum	plasma membrane	24.06	22.28
EES10325	Sorghum	golgi	24.65	21.78
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	20.54	21.37
KXG39193	Sorghum	plastid	21.01	21.01
KXG25260	Sorghum	cytosol	17.02	11.98
KXG31267	Sorghum	cytosol	16.55	9.46
OQU80260	Sorghum	cytosol	12.56	9.44
OQU90190	Sorghum	cytosol	17.14	8.89
KXG23793	Sorghum	cytosol	15.85	6.7
EER87977	Sorghum	cytosol	2.35	3.72

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	EntrezGene:8057479	UniProt:C5Y9W0	EnsemblPlants:EES12298	ProteinID:EES12298
ProteinID:EES12298.1	InterPro:FH2_Formin	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR015425
PFAM:PF02181	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF177	SMART:SM00498	EnsemblPlantsGene:SORBI_3006G108000
SUPFAM:SSF101447	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A8700A	RefSeq:XP_002447970.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:47758956..47762487

Molecular Weight (calculated)

90714.8 Da

IEP (calculated)

9.730

GRAVY (calculated)

-0.375

Length

852 amino acids

Sequence
(BLAST)

001: MPAAMPSFSR RRLLCLFLVA CLAALLFSIA DRAGRTKETD NGEARFRVLR GLDTLGLRQK QQRHAHGHGI SPAPAPARAR LPLLHKDARL PVPGKVAHND
101: NHTRGGNATA ARQSPPRGGG GEQGSKKKST PLVVVAAAAA LSGAALVLLA VLVVFLTCRK FQGRRGAGGG GDQSGGTNKV SFEPGPGMFY LDAIKPYLDD
201: AGRDGGGKAA LEMAGPKGEE PKCDDEEGGG GACSEDDGAE SVHSSCCFQS SHFSYSELAK GGQGDGVSPS PSVRSKRRGS APTTPSDKTK VASPYSPLGP
301: RTPSSDERGR RAHSPSSTSA SVLTEQSFND HELQGTAHSV RSLKFQSGGS ACHAKEAGAE TDAASRKTAP PPPPPPPPPP PPPPPPPPPV MVKQQQNVQK
401: SCGGPAVAPP PPPPPPLLIP QQQNAKRMNG PILPPPQAPP GLFRQTAPVG KNGAPLPKLK PLHWDKVRAA PNRRMVWDRI RSSSFELDEQ MIESLFGYNA
501: AARCSAAKLE EGQSRSPSLG HHVLDPKRLQ NITILMKAVN ATADQIYAAL LQGNGLSVQQ LEALIKMAPT KEEVEKLESY DGDVGSLVAA ERLLKVALTI
601: PCAFARVEAM LYRETFADEV SHIRKSFAML EDACRELMSS KLFLKLLEAV LKTGNRMNVG TARGGAMAFK LDTLLKLADV KGTDGKTTLL HFVVQEMVRS
701: RKPPPARAAE GQPDIVTGLA AELTNVRKTA TVDLDVLTTS VSSLSHGLSR IKALLGTDQL AAGDDKGQRF VAVMAPFVCQ AEEVIRELED GERRVLAHVR
801: DITEYYHGDV GKEEASPLRI FVIVRDFLAM LERVSKEVRG ARGCHGSNQT LP

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.