Factsheet for Bra001148.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74146	Canola	extracellular, golgi, plasma membrane	94.53	96.89
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	79.83	80.22
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	82.75	77.04
GSMUA_Achr7P18740_001	Banana	nucleus	36.7	59.22
KRG96818	Soybean	plasma membrane	46.05	47.91
KRG92894	Soybean	endoplasmic reticulum, vacuole	51.88	47.87
KRH68527	Soybean	plasma membrane	45.44	47.04
KRH33895	Soybean	plasma membrane	51.76	46.35
PGSC0003DMT400063542	Potato	extracellular, golgi, plasma membrane	48.72	44.56
VIT_14s0060g02330.t01	Wine grape	golgi, plasma membrane, vacuole	51.76	44.47
Solyc01g099650.2.1	Tomato	nucleus	48.6	44.3
Os04t0461800-01	Rice	extracellular	42.16	41.66
TraesCS2B01G344200.1	Wheat	golgi	41.43	40.74
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	41.31	40.38
Bra029655.1-P	Field mustard	cytosol	14.58	39.6
Zm00001d003406_P002	Maize	plasma membrane	40.46	39.6
EES12298	Sorghum	plasma membrane	40.95	39.55
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	41.56	37.67
Bra012246.1-P	Field mustard	cytosol	8.87	37.24
Bra001256.1-P	Field mustard	plastid	15.55	33.6
Zm00001d032225_P001	Maize	golgi	35.72	32.96
EES13879	Sorghum	golgi	35.84	32.49
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	18.71	31.43
Os08t0431200-00	Rice	cytosol	18.47	29.23
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.74	28.21
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	27.7	27.94
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	28.68	27.54
Bra029012.1-P	Field mustard	plasma membrane	28.43	27.24
Bra002969.1-P	Field mustard	plasma membrane	28.92	27.14
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	29.4	27.04
Bra039561.1-P	Field mustard	golgi	27.46	27.0
Bra024640.1-P	Field mustard	vacuole	23.57	26.08
Bra031838.1-P	Field mustard	cytosol	13.61	25.45
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	23.94	24.56
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	31.83	24.01
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	21.63	22.06
Bra017889.1-P	Field mustard	nucleus	20.66	21.52
Bra038438.1-P	Field mustard	extracellular	7.78	21.12
Bra023204.1-P	Field mustard	cytosol	18.1	12.81
Bra007822.1-P	Field mustard	cytosol	17.01	12.52
Bra002668.1-P	Field mustard	cytosol	17.5	11.15
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	16.65	11.08
Bra020385.1-P	Field mustard	cytosol	17.25	10.17
Bra005952.1-P	Field mustard	nucleus	17.5	9.73
Bra009307.1-P	Field mustard	cytosol	9.11	9.29
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	17.38	8.79
Bra020386.1-P	Field mustard	cytosol	4.62	8.33

Protein Annotations

EnsemblPlants:Bra001148.1	EnsemblPlants:Bra001148.1-P	EnsemblPlantsGene:Bra001148	Gene3D:1.20.58.2220	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213	PANTHER:PTHR23213:SF177	PFAM:PF02181
PFscan:PS51444	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix
UniParc:UPI0002540A23	UniProt:M4CAB9	MapMan:20.2.2.6.1	:	:	:

Description

AT3G05470 (E=4e-226) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA03:-:14976355..14979096

Molecular Weight (calculated)

91023.2 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.458

Length

823 amino acids

Sequence
(BLAST)

001: MVYFRQILLM IIVLVISLQC CNVFADTKEL GEWTALMVAN GERYRTQIGK LAGEDGGEKK KFPVLEKFRA LLDLIKPSTL RRRSLATSAS LAPWSAPSPS
101: PFPNGGPAES PAYSPAPQRP IPPHLRRPLP HRTHHPSRQH ELTRRKHENR GAFIHVVVSA ACGIGFVVCV VGAFFLYARR RKKNGKTPPF QSSTRKVSIN
201: PSHSLGDDLE KQSSVSVKEV RETEKDVNDN KGVLLVEDVK TSAETEILSD SDNASSFSTK EIVSVHENDE EQQTVDSVSG PVVSNGCDSS DDNESFHSVG
301: GGSSVGSSQR FSEREILPPP PPPPPPPPLP PGLHTLSLPK TTTLSSQLTA KVCASSSDST LPSTPPPLRP PPPPPPPSQQ PQATNKTPPP PLSLDFSQRR
401: PLGKNGAPLP KLKPLHWDKV RATPNRTMVW DRLRASSFEF DEEMIESLFG YTMQSSTKNE EGKCKTPSPG KHLLEPKRLQ NFTILLKALN ANADQICSAL
501: GKGLRLQQLE ALVKMVPSKE EELKLCSYKG EVDELGSAEK FLRAVVGVPF AFQRAEAMLY RETFEDEVVH LRNSFSMLEE ACKELKSSRL FLKLLEAVLK
601: TGNRMNVGTI RGGAKAFKLD ALLKLSDVKG TDGKTTLLHF VVQEISRSEG IRVSDSIMGR IMNQRTNENR TAEEIDEDHR RMGLDLVSGL NTELRNVKKT
701: ATIDMEGLVS SVSNLRDGLG GLKCLASEKL KGDEENRAFV SSMSSFLRYG ERSLEELRED EKRVMGRVGE IAEYFHGDVR GDEKNPLRIF VIVRDFLGML
801: DLVCRELRCV RVPNSPSPLA PFR

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.