Factsheet for Bra007822.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34742	Canola	cytosol	98.12	97.68
CDX76779	Canola	cytosol	95.26	95.34
AT3G32400.2	Thale cress	cytosol	35.69	80.61
AT2G25050.1	Thale cress	cytosol	83.9	80.31
GSMUA_Achr1P25960_001	Banana	mitochondrion	13.6	72.38
Bra038438.1-P	Field mustard	extracellular	14.76	54.46
GSMUA_Achr3P04690_001	Banana	cytosol	51.25	50.31
Bra020386.1-P	Field mustard	cytosol	20.3	49.78
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	28.62	46.78
Bra002668.1-P	Field mustard	cytosol	52.24	45.2
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	59.48	45.18
KRH05363	Soybean	cytosol	58.23	44.47
Bra023204.1-P	Field mustard	cytosol	44.01	42.3
Bra020385.1-P	Field mustard	cytosol	51.61	41.33
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	44.45	40.18
GSMUA_Achr1P25970_001	Banana	cytosol	26.21	39.28
Bra005952.1-P	Field mustard	nucleus	47.67	36.01
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.3	33.19
Bra009307.1-P	Field mustard	cytosol	20.66	28.62
Bra029655.1-P	Field mustard	cytosol	5.64	20.79
Bra001256.1-P	Field mustard	plastid	6.53	19.16
Bra012246.1-P	Field mustard	cytosol	3.22	18.37
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	13.24	18.07
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	14.31	17.84
Bra002969.1-P	Field mustard	plasma membrane	13.69	17.45
Bra029012.1-P	Field mustard	plasma membrane	13.33	17.35
Bra039561.1-P	Field mustard	golgi	12.88	17.2
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	12.52	17.16
Bra024640.1-P	Field mustard	vacuole	11.36	17.07
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	12.52	17.01
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	12.97	16.92
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	7.33	16.73
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	11.81	16.46
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	12.88	16.09
Bra031838.1-P	Field mustard	cytosol	6.08	15.45
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	15.03	15.4
Bra017889.1-P	Field mustard	nucleus	9.21	13.04
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	9.3	12.89

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra007822	EnsemblPlants:Bra007822.1
EnsemblPlants:Bra007822.1-P	ncoils:Coil	InterPro:FH2_Formin	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:M4CUC8	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0002542D08
SEG:seg	:	:	:	:	:

Description

AT2G25050 (E=1e-239) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA09:+:31070385..31075379

Molecular Weight (calculated)

124063.0 Da

IEP (calculated)

8.237

GRAVY (calculated)

-0.345

Length

1118 amino acids

Sequence
(BLAST)

0001: MALFRKFFYK KPPEGLVEIS ERVYVFDCCL TTDMLEEEEY RVYVGRIMSQ LREQFPGASF MVFNFRDGGE STSLMESVLS EHDMTTIMDY PRHYEGCPLL
0101: TMETVHHFLK SSENWLLLSP QNILLAHCER GGWPVLAFML ASLLLYRKQF SGEEKTLEMM YKYAPRELLQ LMSPLNPLPS QLRFLRYVSS RSVGGHSQWP
0201: PLDRAVTLDC INLKLVPDFD GEGGCRPIFR IYGQDPFMAS DRTSKVLFSM PKRSKAVKHY KQADCEVVKI DINCHILGDV VLECITLDSD HEREEMMFRV
0301: VFNTAFLRSN ALLLNRDDID VLWNTTDRFP KGFRAEVIFS EMGAGNNHVS VDLTDMEEND GLPMEAFAKV QEIFSDGEWL DPNSDVAVTV FNQITAANIL
0401: QESLDSGSPR SPDSRSLLES ALEKVREKTK LMISENVAVS PDAFSPVWRE RDSDSCHRSY ADPNSLIKKV DEPQGLRVSV QRQAHSKIIS PRLLQSSVTS
0501: PVLNRSPTQG SSPASVSRFH SSPSSLGITS ILHDHGPGKG EEATSSSSPS ITFQPALHPL ILKASPSNGS PPAEAVVKPP TLPLLKPLKI LSPPPPPPPP
0601: PPPASSSSLR STATQGPPPP PPPPPPPQRS AQPFFPSPPP LPPPKKVVTT SNAPPPPPPP LRSKPLSGAA APPVPPPPAP SALSRSQNGG CNGNVPPVPG
0701: PPLGLKGRGM LQTSLKGQGQ TRKANLKPYH WLKLTRALQG SLWAEAQQTP DEAATAPEFD ISELEKLFSA AIPSSDNETK GGKSGRRGRP KVQKVQLIEL
0801: RRAYNCEIML SKVKIPLPDL MSSVLALDES VIDVDQVDNL IKFCPTKEEA ELLKGYTGNK ENLGRCEQFF LELLKVPRVE TKLRVFSYKI QFHSQVRGSA
0901: KLKRIMQTIL SLGNALNHGT ARGSAIGFRL DSLLKLTDTR SRNSKMTLMH YLCKVLAEKL PELLDFPKDL VSLEAATKIQ LKYLAEEMQA IRKGLEKVVL
1001: EFTTSETDGP VSKHFRMNLK EFLSFAEGEV RSLASLYSTV GGSADALALY FGEDPARVPF EQVVSTLQNF VRIFVRSHEE NCKQVEFEKR RVQKEAENEK
1101: LKKVLGTQKL HVPAPTIL

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.