Factsheet for Bra020385.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02799	Canola	cytosol	83.81	93.53
CDY32721	Canola	cytosol	83.24	93.41
Bra002668.1-P	Field mustard	cytosol	75.86	81.97
AT5G58160.1	Thale cress	cytosol	72.13	79.54
PGSC0003DMT400029052	Potato	cytosol	14.47	73.19
Bra020386.1-P	Field mustard	cytosol	22.71	69.52
PGSC0003DMT400020452	Potato	cytosol	7.66	64.85
GSMUA_Achr1P25980_001	Banana	plasma membrane	12.03	59.36
Bra038438.1-P	Field mustard	extracellular	11.96	55.12
VIT_11s0016g00160.t01	Wine grape	cytosol	45.27	54.77
KRH72294	Soybean	cytosol	46.49	53.68
KRH03063	Soybean	cytosol	45.34	52.4
Bra007822.1-P	Field mustard	cytosol	41.33	51.61
Solyc12g010110.1.1	Tomato	cytosol	41.33	44.42
Bra023204.1-P	Field mustard	cytosol	36.32	43.59
TraesCS1A01G075600.1	Wheat	cytosol	43.05	43.3
TraesCS1D01G077900.1	Wheat	cytosol	43.41	43.25
TraesCS1B01G094200.1	Wheat	cytosol	42.91	42.69
Solyc07g005480.2.1	Tomato	vacuole	26.72	42.19
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	37.25	42.04
OQU80260	Sorghum	cytosol	33.74	41.53
TraesCS6B01G389300.1	Wheat	cytosol	38.11	39.82
Os08t0280200-02	Rice	nucleus	25.43	39.75
TraesCS6D01G339300.1	Wheat	cytosol	37.89	39.63
Os02t0794900-00	Rice	cytosol	38.75	39.23
KXG31267	Sorghum	cytosol	40.62	38.03
Zm00001d032101_P001	Maize	cytosol	18.27	37.44
Bra005952.1-P	Field mustard	nucleus	39.54	37.3
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.68	34.05
Bra009307.1-P	Field mustard	cytosol	17.69	30.61
HORVU5Hr1G123610.1	Barley	cytosol, plastid	0.86	30.0
Bra029655.1-P	Field mustard	cytosol	5.01	23.1
Bra001256.1-P	Field mustard	plastid	5.59	20.47
Bra012246.1-P	Field mustard	cytosol	2.72	19.39
Bra002969.1-P	Field mustard	plasma membrane	11.82	18.81
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	10.96	18.75
Bra039561.1-P	Field mustard	golgi	11.1	18.52
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	11.89	18.51
Bra029012.1-P	Field mustard	plasma membrane	11.25	18.28
Bra024640.1-P	Field mustard	vacuole	9.6	18.01
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	6.3	17.96
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	10.24	17.46
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	10.17	17.25
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	10.1	16.45
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	9.31	16.21
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	12.61	16.13
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	10.17	15.87
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	8.24	14.25
Bra031838.1-P	Field mustard	cytosol	4.37	13.86
Bra017889.1-P	Field mustard	nucleus	7.74	13.67

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra020385	EnsemblPlants:Bra020385.1
EnsemblPlants:Bra020385.1-P	ncoils:Coil	InterPro:FH2_Formin	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:M4DV42	PFAM:PF02181	PFAM:PF10409	PRINTS:PR01217	PFscan:PS51181
PFscan:PS51182	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF190	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498
SMART:SM01326	SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase
UniParc:UPI000254306C	SEG:seg	:	:	:	:

Description

AT5G58160 (E=2e-302) | actin binding

Coordinates

chrA02:-:6491606..6497627

Molecular Weight (calculated)

155285.0 Da

IEP (calculated)

8.182

GRAVY (calculated)

-0.573

Length

1396 amino acids

Sequence
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF SDDSWEEDNY KTYMSGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCERGA WPVLAFMLAA LLIYRKQYSG EYKTLDMICK QAPRELMHLF SPLNPIPSQL RYLQYVSRRN VVSEWPPLDR
0201: ALTMDCVILR CVPDVSGQGG CRPIFRVYGQ DPFFVDDKKP KLLYSTPKKG KHLRIYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRAVFNT
0301: AFIRSNILML NRDEVDTLWD IKEQFPKGFR VELLFSDMDA ASSVDSMSFS CLEEKDGLPI EVFSKVHDFF NQVDWDDQTD ATRNILQHLA IANAAQDRPD
0401: GNSSPRPQGL SPKSIHDIVK QAAIENNAKL KLSSMSEVET VDTPEKRASG PVKKLIAEDM HSVLQISSQA NTTSHESPSL KLVHHSATVK PFVDGSDFSE
0501: NPEEKILRAP GENRSILSPP HPERTSLAPT GALPQPPPFP IVASQPSEKC QHSIVQPAET LSQRNAWVSL AGSTFHQTTP NAEHPMTLPS TSLPLSPASD
0601: VNTQESSKIT KSSSVMPSPT LSATPAKESQ TETSGSFCPP ASPPVGAPND VAPVSKSDKT PVISRPPPPP PPPMQHSDQN TVARVSSPIP PPALATAASP
0701: RPRPPPPPAP PTPPPLPTSS APPPPPPPTP PRLPTSSAPP PPPPPNAPPP PPIGQMKAPS APPPPPPLGQ MRPPSAPPPP PPPKLGTKSS PSTGSRVPPT
0801: PALPAGPLSS GKRRMLPVNS KNNTAKKLKP YHWLKLTRAV NGSLWAETQM SSEASKAPEI DITELESLFS ASAPEEAGKS KLNSCRGPKP EKVQLIEHRR
0901: AYNCEIMLSK VKVPLQDLMY SVLNLEESAL DADQVENLIK FCPTREEMEL LKGYNGDKDK LGKCELFFLE MMKVPRVETK LRVFSFKIQF RSQISELRNS
1001: LNVVNSAAEQ VKNSEKFKRI MQTVLSLGNA LNQGTARGAA VGFKLDSLPK LSETRARNNR MTLMHYLCKI LAEKMPEVLD FAKDFSSLEP ATKIQLKFLA
1101: EEMQAINKGL EKIVQELSLS ESDGPISHNF NKILKEFLHY AEAEVRSLAS LYSGVGRNVD GLIFYFGEDP TKCPFEQGVS TLLNFVRLFN RAHEENVKQV
1201: EAEAKKKAEE EKLKIGRLDK ESSKPLSLEK EKAKISGLDK ESSNPLSLEE QVKKERRKIS GLDQKKRKPL SLDEHNKKEK EKISGLDQKK RKPLSLDEHN
1301: KKEKEKISGL DKESSNPLSL EEQFKKERRK ISGLDQESRK PLSLDEHNKK EKAKISGLDQ ESRKPLSLDE QVKQEKAKIN GLDQETKEPL NERTAA

Best Arabidopsis Sequence Match ( AT5G58160.1 )
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP

Arabidopsis Description

FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.