Factsheet for Bra038438.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
cytosol 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra035381.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31810.1	Bra035381.1-P	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27130	Canola	cytosol, mitochondrion	95.05	73.28
GSMUA_Achr5P13600_001	Banana	extracellular	51.49	52.53
PGSC0003DMT400079306	Potato	cytosol	69.64	52.36
Solyc08g075650.2.1	Tomato	cytosol	69.64	51.97
Os10t0119300-01	Rice	mitochondrion	67.33	48.92
HORVU2Hr1G092520.9	Barley	cytosol	65.35	23.4
TraesCS2B01G406800.1	Wheat	cytosol	65.35	21.24
Bra023204.1-P	Field mustard	cytosol	80.2	20.89
Bra029655.1-P	Field mustard	cytosol	20.13	20.13
AT1G31810.1	Thale cress	cytosol	79.21	19.51
KRH62678	Soybean	cytosol	71.29	17.91
KRH39699	Soybean	cytosol	70.63	17.46
KXG25260	Sorghum	cytosol	67.33	16.86
VIT_02s0033g01360.t01	Wine grape	cytosol, nucleus, plasma membrane	69.97	16.22
Bra012246.1-P	Field mustard	cytosol	10.23	15.82
Bra007822.1-P	Field mustard	cytosol	54.46	14.76
Bra001256.1-P	Field mustard	plastid	17.82	14.17
Bra002668.1-P	Field mustard	cytosol	56.11	13.16
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	52.81	12.93
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	19.8	12.24
Bra020385.1-P	Field mustard	cytosol	55.12	11.96
Bra005952.1-P	Field mustard	nucleus	54.13	11.08
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	56.44	10.51
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	22.11	8.21
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	22.11	8.18
Bra039561.1-P	Field mustard	golgi	22.44	8.12
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	22.11	7.82
Bra029012.1-P	Field mustard	plasma membrane	22.11	7.8
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	21.12	7.78
Bra024640.1-P	Field mustard	vacuole	18.81	7.66
Bra002969.1-P	Field mustard	plasma membrane	21.78	7.53
Bra017889.1-P	Field mustard	nucleus	19.14	7.34
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	21.45	7.26
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	19.14	7.23
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.12	7.13
Bra031838.1-P	Field mustard	cytosol	10.23	7.05
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	17.16	6.44
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	20.79	5.77
Bra009307.1-P	Field mustard	cytosol	11.88	4.46
GSMUA_Achr5P13590_001	Banana	cytosol	13.53	4.46
KRH15653	Soybean	cytosol	22.44	4.3
Solyc08g075670.1.1	Tomato	cytosol	2.31	1.4
Bra020386.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra038438.1	EnsemblPlants:Bra038438.1-P	EnsemblPlantsGene:Bra038438	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	PFAM:PF02181	PFscan:PS51444	SEG:seg
SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI0002546755	UniProt:M4FBH2	MapMan:20.2.2.6.2	:

Description

AT1G31810 (E=7e-086) | actin binding

Coordinates

chrA08:+:8735316..8737759

Molecular Weight (calculated)

34142.3 Da

IEP (calculated)

8.790

GRAVY (calculated)

-0.030

Length

303 amino acids

Sequence
(BLAST)

001: MLTKIKIPLP DMLSAVLALD SSVLDIDQVE NLIKFCPTKE EMQLLRFFLE LMKVPRIEAK LRVFGFKITF ASQAEDLKSC LNKINAATKE VKESAKLRQI
101: MQTILTLGNA LNQGTARGSA VGFKLDSLLK LSDTRARNNK MTLMHYLCKV DAHISLISII PECTFVLESC WILLMTLFTW KLPKIELKTL AEEMQAADKG
201: LKKVVQELVA SENDGAISLG FRKVLKEFLD IAEAEVRLLA SLHKESGGNA DSLCQYFVTK ILILFMKTFI KSREENEKQA EADKKKLEKD ATKEVPLAKK
301: DNE

Best Arabidopsis Sequence Match ( AT1G31810.1 )
(BLAST)

0001: MSLLSRFFYK RPPDGLLEFA DRVYVFDSCF CTEVLADSLY QIFLHEVIND LHEEFPESSF LAFNFREGEK KSVFAETLCE YDVTVLEYPR QYEGCPMLPL
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT

Arabidopsis Description

FH14Formin-like protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.