Factsheet for Bra012246.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001256.1-P	Field mustard	plastid	96.94	49.87
Bra029655.1-P	Field mustard	cytosol	58.16	37.62
VIT_00s0227g00200.t01	Wine grape	cytosol	27.55	35.29
Os01t0897700-01	Rice	cytosol	39.8	31.97
CDX74041	Canola	golgi, plasma membrane, plastid	96.43	26.51
PGSC0003DMT400056393	Potato	cytosol	48.98	20.0
GSMUA_Achr6P18370_001	Banana	nucleus	47.96	16.7
Bra031838.1-P	Field mustard	cytosol	35.71	15.91
AT3G07540.1	Thale cress	plasma membrane	59.69	13.91
GSMUA_Achr11P...	Banana	mitochondrion, plastid	29.08	13.26
TraesCS1A01G011800.1	Wheat	extracellular	35.71	13.13
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	44.39	12.97
KRH47952	Soybean	cytosol	49.49	12.5
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	31.12	12.45
TraesCS1D01G010200.1	Wheat	plastid	35.71	12.32
TraesCS1B01G059400.1	Wheat	plastid	35.2	12.26
GSMUA_Achr5P25760_001	Banana	mitochondrion	26.53	11.85
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	44.39	11.07
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	44.39	11.05
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	45.41	11.03
Zm00001d021173_P001	Maize	plasma membrane	42.86	11.02
TraesCS5A01G304700.1	Wheat	golgi	43.88	10.93
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	43.88	10.91
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	46.94	10.74
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	48.98	10.56
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	45.41	10.47
Bra038438.1-P	Field mustard	extracellular	15.82	10.23
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	46.43	10.17
Bra024640.1-P	Field mustard	vacuole	37.76	9.95
Zm00001d012158_P001	Maize	extracellular, plasma membrane	47.96	9.88
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	41.84	9.74
Zm00001d042506_P002	Maize	extracellular, plasma membrane	47.45	9.73
Solyc06g082910.2.1	Tomato	extracellular	46.43	9.72
HORVU1Hr1G002300.8	Barley	plastid	35.71	9.67
OQU88036	Sorghum	extracellular, plasma membrane	45.92	9.57
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	45.92	9.53
TraesCS3A01G397900.1	Wheat	plasma membrane	45.92	9.48
HORVU3Hr1G089510.1	Barley	plasma membrane	45.92	9.46
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	40.31	9.42
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.86	9.36
TraesCS3D01G391800.1	Wheat	mitochondrion	45.41	9.35
TraesCS3B01G429900.1	Wheat	plasma membrane	45.41	9.33
GSMUA_Achr10P...	Banana	plastid	36.73	8.97
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	37.76	8.92
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	48.98	8.9
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	37.24	8.87
KRH00989	Soybean	extracellular, golgi, vacuole	46.94	8.85
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	35.71	8.73
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	48.47	8.71
Bra029012.1-P	Field mustard	plasma membrane	37.76	8.61
KRH40232	Soybean	endoplasmic reticulum, extracellular	45.41	8.58
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	35.71	8.55
Bra039561.1-P	Field mustard	golgi	36.22	8.48
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	35.2	8.46
Bra002969.1-P	Field mustard	plasma membrane	37.24	8.32
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	34.69	8.1
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	32.65	7.81
Bra017889.1-P	Field mustard	nucleus	31.12	7.72
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	28.06	7.61
GSMUA_Achr7P23740_001	Banana	plastid	38.78	6.34
Zm00001d035757_P003	Maize	plasma membrane	32.14	3.74
Bra007822.1-P	Field mustard	cytosol	18.37	3.22
Bra002668.1-P	Field mustard	cytosol	19.9	3.02
Bra023204.1-P	Field mustard	cytosol	17.35	2.92
Bra020385.1-P	Field mustard	cytosol	19.39	2.72
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	16.84	2.67
Bra005952.1-P	Field mustard	nucleus	16.84	2.23
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.84	2.03
Bra009307.1-P	Field mustard	cytosol	5.1	1.24
Bra020386.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra012246.1	EnsemblPlants:Bra012246.1-P	EnsemblPlantsGene:Bra012246	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
PANTHER:PTHR23213	PANTHER:PTHR23213:SF261	PFAM:PF02181	PFscan:PS51444	SEG:seg	SUPFAM:SSF101447
UniParc:UPI000254158B	UniProt:M4D6Y6	MapMan:35.1	:	:	:

Description

AT3G07540 (E=1e-033) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA07:+:9097123..9097833

Molecular Weight (calculated)

22013.7 Da

IEP (calculated)

4.448

GRAVY (calculated)

0.166

Length

196 amino acids

Sequence
(BLAST)

001: MHCSLLLLLA ACEELRNTKT LLKLLEAVFE RGTNSLEALL ELVGRTNILH SVVHGIIESE GIRGLQAVGS LSSVFVEVKK AGEMDYGVLR SEVFDIYQGV
101: KKVSEVLLLL NGENGDGEEQ RWWTFRESMT RFLETAIEEI KMIETIEGCV ISAVKEVTEY FHGDSAKEEA QVLRVFVVVR DFLFILDEVC KEIDAS

Best Arabidopsis Sequence Match ( AT3G07540.1 )
(BLAST)

001: MDGLCYVIFI IFSLLSCAFS PLSYASPATF SRRHLLQAPV TDPSTFSPPF FPLYSSTSPP PPPSPPQPLP PPAPTFATFP ANISALVLPR SPKPQTPSRT
101: LLIPAISAVL AAATLIALAF FFYGRWRGQT SHFKDESKSL ASDISQSQQQ TLPCPPPRNN NTQNKLSVAP STSDVLYLGN VVTSSGSGFV KPESPDISPL
201: PPLPARSFLL QHHSEANLDE EEEDDDFYSP LASIAGQESR DRRINPYSNC SCSISSHSDS PAMSPSAAMS PPMNSTAPHW STNQNTHSPS SPERTVRNNK
301: RYGGQSLRMF SLWNQNLGFP RISSASTSPE RGMIRTPDAY ARSSMYSSVS TTPDRFFRKV LDSSPPRWND FSRNVKSLFL SSTSASPARD FCINISESSR
401: SLKSSWEKPE LDTTQQRESA AAAVTLPPPQ RPPPAMPEPP PLVPPSQSFM VQKSGKKLSF SELPQSCGEG TTDRPKPKLK PLPWDKVRPS SRRTNTWDRL
501: PYNSSNANSK QRSLSCDLPM LNQESKVLDP RKSQNVAVLL TTLKLTTNDV CQALRDGHYD ALGVELLESL ARVAPSEEEE KKLISYSDDS VIKLAPSERF
601: LKELLNVPFV FKRVDALLSV ASFDSKVKHL KRSFSVIQAA CEALRNSRML LRLVGATLEA GMKSGNAHDF KLEALLGLVD IKSSDGRTSI LDSVVQKITE
701: SEGIKGLQVV RNLSSVLNDA KKSAELDYGV VRMNVSKLYE EVQKISEVLR LCEETGHSEE HQWWKFRESV TRFLETAAEE IKKIEREEGS TLFAVKKITE
801: YFHVDPAKEE AQLLKVFVIV RDFLKILEGV CKKMEVTSSL A

Arabidopsis Description

FH10Formin-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.