Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 98.1 | 97.59 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 96.94 | 96.74 |
| Os01t0897700-01 | Rice | cytosol | 23.81 | 92.62 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 92.1 | 91.81 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 79.45 | 80.21 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 77.34 | 77.18 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 77.45 | 76.88 |
| PGSC0003DMT400056393 | Potato | cytosol | 32.14 | 63.54 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 28.13 | 60.82 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 9.69 | 60.13 |
| AT3G25493.1 | Thale cress | vacuole | 8.64 | 51.25 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 49.74 | 50.75 |
| KRH47952 | Soybean | cytosol | 40.15 | 49.1 |
| Bra029655.1-P | Field mustard | cytosol | 15.49 | 48.51 |
| PGSC0003DMT400013717 | Potato | plastid | 42.57 | 46.92 |
| Bra012246.1-P | Field mustard | cytosol | 9.48 | 45.92 |
| Solyc12g019480.1.1 | Tomato | nucleus | 42.68 | 45.61 |
| KRH71295 | Soybean | vacuole | 42.26 | 45.57 |
| PGSC0003DMT400064911 | Potato | endoplasmic reticulum, plasma membrane | 35.93 | 45.17 |
| KRH50174 | Soybean | vacuole | 42.36 | 44.87 |
| Solyc06g082910.2.1 | Tomato | extracellular | 43.94 | 44.55 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 42.57 | 44.44 |
| Solyc08g014430.2.1 | Tomato | nucleus | 35.3 | 44.25 |
| Bra001256.1-P | Field mustard | plastid | 17.7 | 44.09 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 43.73 | 43.96 |
| TraesCS5A01G304700.1 | Wheat | golgi | 36.04 | 43.46 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 35.41 | 42.32 |
| Bra004786.1-P | Field mustard | mitochondrion, plasma membrane, plastid | 37.51 | 41.54 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 36.88 | 41.52 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 47.1 | 41.43 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 45.63 | 41.2 |
| CDY17909 | Canola | golgi, vacuole | 36.78 | 41.16 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 46.15 | 40.71 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 45.42 | 40.7 |
| CDY44259 | Canola | plasma membrane, vacuole | 36.04 | 40.57 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 37.93 | 40.27 |
| Bra013217.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 46.26 | 40.24 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 37.72 | 40.22 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 43.41 | 39.65 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 42.99 | 39.34 |
| Bra000328.1-P | Field mustard | golgi, plasma membrane, vacuole | 36.99 | 39.22 |
| TraesCS2A01G193700.1 | Wheat | golgi | 32.35 | 39.11 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 20.76 | 36.96 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 30.87 | 36.44 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 28.56 | 34.65 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 29.19 | 34.32 |
| CDX85333 | Canola | plasma membrane | 29.72 | 34.26 |
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 29.08 | 34.2 |
| CDY35941 | Canola | plastid | 26.87 | 34.05 |
| CDY28040 | Canola | plastid | 27.29 | 33.64 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 24.87 | 33.1 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 24.45 | 32.13 |
| AT3G07540.1 | Thale cress | plasma membrane | 27.19 | 30.68 |
| TraesCS2A01G337800.1 | Wheat | mitochondrion, plasma membrane | 25.71 | 26.87 |
| TraesCS6A01G135200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 23.6 | 26.35 |
| TraesCS2A01G214500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.13 | 26.22 |
| TraesCS5A01G075500.1 | Wheat | cytosol | 8.43 | 26.14 |
| TraesCS6A01G312000.2 | Wheat | plastid | 23.08 | 24.15 |
| TraesCS2A01G044700.1 | Wheat | extracellular, plasma membrane | 26.03 | 23.8 |
| TraesCS2A01G388800.1 | Wheat | cytosol | 9.06 | 22.51 |
| TraesCS2A01G183000.1 | Wheat | cytosol | 9.06 | 21.08 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 18.12 | 12.39 |
| TraesCS4A01G061100.1 | Wheat | mitochondrion | 7.8 | 8.21 |
| TraesCS6A01G357300.1 | Wheat | endoplasmic reticulum, golgi | 2.0 | 5.71 |
| TraesCS2A01G182900.1 | Wheat | cytosol, golgi, nucleus | 2.11 | 5.63 |
| TraesCS2A01G388700.1 | Wheat | cytosol | 2.85 | 5.57 |
| TraesCS7A01G148100.1 | Wheat | mitochondrion | 2.63 | 4.55 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G397900.1 | EnsemblPlantsGene:TraesCS3A01G397900 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | MapMan:20.2.2.6.1 | : | : |
Description
No Description!
Coordinates
chr3A:+:645129846..645133020
Molecular Weight (calculated)
101057.0 Da
IEP (calculated)
9.964
GRAVY (calculated)
-0.406
Length
949 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSLRRLPRR GLPPLLLVLL PILLAPSSSR AGVLAAPATA RRQLHQPFLP DPSSAAPPSQ APPGPAPPFF PTLQAPPPPP GTPTAPEQPT YPALVLPNPG
101: TPAGSATAAP SDGAGGNKSS RSSKLVPAIL LPLLTVAVLG LSIAFFFKRR RTNAGRGVGG GCVGGGESKF LHPERASLFA RDEFGGSGRG APATTAASTA
201: PSAESLYVGT LAGREDGKSS DTTSSGDEVS RSSGGSPELR PLPPLVGRQC GPAGSRSPGI GGSSPSSGDE EFYSPRGSSK ASGSQRTLAA AVQAAVAARD
301: RSRTPSPGSA VSTPSYPSSP GATMSPAPSS PPLLSSPGQS CRRSAKARSE SARDVFGMPP TPPPPPPPFA PTLPPPPPPR RKPPSPSPPS SPLVSTPPAL
401: RSATDTISKN PFTQPPAPPT STRGQPPPPP PPPPPPLGYW ESRVRKPGMS KEAMSPALSP PPQAANSRSV PPTDAFPGRL QDNADHGDKS EETTPRPKLK
501: PLHWDKVRAS SDRAMVWDQL KSSSFQVNEE MIETLFICNP ANAAPKEATK RPALPTPKAE NKVLLDPKKA QNIAILLRAL NVTKEEVCEA LCEGNTQNFG
601: ADLLETLLKM APTKEEEIKL REFKEETSPI KLGPSEKFLK AVLDVPFAFK RVDAMLYIAN FESEVKYLKN NFEILEAACE ELRNSRLFLK LLEAILKTGN
701: RMNVGTNRGD AHAFKLDTLL KLADVKGTDG KTTLLHFVVQ EIIRTEGSRL SASNQSTPRT LANPLRDELE CKKLGLQVVA GLGNELSSVK KAAAMDSDVL
801: SSYVAKLAGG IEKITEVLRL NEELNTRDDA WRFHDTMQKF LKKADDEILR VQAQESVALS LVKEITEYFH GDSAKEEAHP FRIFMVVRDF LSVLTQVCRE
901: VGRINDRTIA SSVRHFPVPV NPMMPQLFPR IHALRAGISD DESSVASSP
101: TPAGSATAAP SDGAGGNKSS RSSKLVPAIL LPLLTVAVLG LSIAFFFKRR RTNAGRGVGG GCVGGGESKF LHPERASLFA RDEFGGSGRG APATTAASTA
201: PSAESLYVGT LAGREDGKSS DTTSSGDEVS RSSGGSPELR PLPPLVGRQC GPAGSRSPGI GGSSPSSGDE EFYSPRGSSK ASGSQRTLAA AVQAAVAARD
301: RSRTPSPGSA VSTPSYPSSP GATMSPAPSS PPLLSSPGQS CRRSAKARSE SARDVFGMPP TPPPPPPPFA PTLPPPPPPR RKPPSPSPPS SPLVSTPPAL
401: RSATDTISKN PFTQPPAPPT STRGQPPPPP PPPPPPLGYW ESRVRKPGMS KEAMSPALSP PPQAANSRSV PPTDAFPGRL QDNADHGDKS EETTPRPKLK
501: PLHWDKVRAS SDRAMVWDQL KSSSFQVNEE MIETLFICNP ANAAPKEATK RPALPTPKAE NKVLLDPKKA QNIAILLRAL NVTKEEVCEA LCEGNTQNFG
601: ADLLETLLKM APTKEEEIKL REFKEETSPI KLGPSEKFLK AVLDVPFAFK RVDAMLYIAN FESEVKYLKN NFEILEAACE ELRNSRLFLK LLEAILKTGN
701: RMNVGTNRGD AHAFKLDTLL KLADVKGTDG KTTLLHFVVQ EIIRTEGSRL SASNQSTPRT LANPLRDELE CKKLGLQVVA GLGNELSSVK KAAAMDSDVL
801: SSYVAKLAGG IEKITEVLRL NEELNTRDDA WRFHDTMQKF LKKADDEILR VQAQESVALS LVKEITEYFH GDSAKEEAHP FRIFMVVRDF LSVLTQVCRE
901: VGRINDRTIA SSVRHFPVPV NPMMPQLFPR IHALRAGISD DESSVASSP
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.