Factsheet for TraesCS5A01G075500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G089100.1	Wheat	cytosol	98.37	98.37
Zm00001d030781_P001	Maize	cytosol	28.1	80.37
Zm00001d030780_P001	Maize	cytosol	30.39	52.25
TraesCS2A01G388800.1	Wheat	cytosol	62.42	50.0
TraesCS2A01G183000.1	Wheat	cytosol	66.34	49.75
HORVU5Hr1G020180.51	Barley	mitochondrion	92.16	14.45
TraesCS1A01G075600.1	Wheat	cytosol	63.07	13.9
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	71.9	12.6
KXG23793	Sorghum	cytosol	82.03	12.45
Zm00001d041515_P003	Maize	mitochondrion	81.7	11.68
TraesCS1A01G011800.1	Wheat	extracellular	18.3	10.51
TraesCS5A01G304700.1	Wheat	golgi	25.82	10.04
TraesCS2A01G193700.1	Wheat	golgi	24.84	9.68
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	25.16	8.65
TraesCS3A01G397900.1	Wheat	plasma membrane	26.14	8.43
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	22.55	8.12
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.51	7.93
TraesCS1A01G327400.1	Wheat	plasma membrane	20.59	7.84
TraesCS6A01G312000.2	Wheat	plastid	23.2	7.83
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	22.22	7.49
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	24.84	7.32
TraesCS4A01G061100.1	Wheat	mitochondrion	14.38	4.88
TraesCS2A01G388700.1	Wheat	cytosol	0.65	0.41
Os04t0245000-00	Rice	plasma membrane	1.31	0.31
TraesCS2A01G182900.1	Wheat	cytosol, golgi, nucleus	0.0	0.0
TraesCS6A01G357300.1	Wheat	endoplasmic reticulum, golgi	0.0	0.0
TraesCS7A01G148100.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5A01G075500.1	EnsemblPlantsGene:TraesCS5A01G075500	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil
PANTHER:PTHR23213	PANTHER:PTHR23213:SF218	PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	MapMan:20.2.2.6.2	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:90913931..90925320

Molecular Weight (calculated)

34402.6 Da

IEP (calculated)

5.055

GRAVY (calculated)

-0.195

Length

306 amino acids

Sequence
(BLAST)

001: MSLENPQMDI RRANNTEIML TKIKMPLSEM MSAALALDDS VLDADQVENL IKFCPTKEEM ELLKNFTGDK ETLGKCEQFF LELMKVPRIE SKFRIFAFKI
101: QFQTQIRDVR KNLLTVASAC EELRGSEKLK VIMKNILLIG NTLNEGTPRG QAVGFRLDSI LKLVETRATS SRTTLMHFLC KSLAGKSPEL LDFHEDLVSL
201: EAASKLQLKA LAEEQQAVVK GLEKVEQELT ASESDGPVSD VFRKTLKEFL DDSGADVRAL SALYADVGRS ADALSLYFGE DPAKYPFEQG NFHAKLSIES
301: VYVRWF

Best Arabidopsis Sequence Match ( AT3G32400.2 )
(BLAST)

001: MDIRELIDIT ELSSIATEGP PPPPPPPLLQ PHHSALSSSP LPPPLPPKKL LATTNTPPPP PPPLHSNSQM GAPTSSLVLK SPHNLKGQGQ TRKANLKPYH
101: WLKLTRAVQG SLWAEAQKSD EAATAPDFDI SEIEKLFSAV NLSSNSENNG GKSGRRARPK VEKVQLIELK RAYNCEIMLS KVKIPLPDLM SSVLALDESV
201: IDVDQVDNLI KFCPTKEEAE LLKGFIGNKE TLGRCEQFFL ELLKVPRVET KLRVFSFKIQ FHSQVTDLRR GLNTIHSATN EVRGSTKLKR IMQTILSLGN
301: ALNHGTARGS AIGFHLDSLL KLTDTRSRNS KMTLMHYLCK VLAEKLPGLL NFPKDMVSLE AATNIQLKYL AEEMQATSKG LEKVVQEFTA SETDCQISKH
401: FHMNLKEFLS VAEGEVRSLA SLYSTVGGSA DALALYFGED PARVPFEQVV STLQNFVRIF VRSHEENCKQ VEFEKKRAQK EAENEKLKKG VYNEN

Arabidopsis Description

FH17Formin-like protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.