Factsheet for TraesCS2A01G182900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G190700.1	Wheat	cytosol	98.59	98.59
TraesCS2B01G209500.1	Wheat	cytosol	98.31	98.31
Zm00001d017027_P001	Maize	cytosol	47.61	70.71
Solyc06g069660.1.1	Tomato	mitochondrion	58.87	61.47
TraesCS6A01G357300.1	Wheat	endoplasmic reticulum, golgi	50.7	54.05
AT3G32420.1	Thale cress	cytosol	14.08	46.73
TraesCS2A01G388700.1	Wheat	cytosol	44.79	32.78
TraesCS7A01G148100.1	Wheat	mitochondrion	45.35	29.33
HORVU2Hr1G034470.10	Barley	cytosol	94.37	28.88
CDX69992	Canola	cytosol	56.62	26.55
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	63.38	24.17
CDX99027	Canola	nucleus	46.76	19.24
Bra009307.1-P	Field mustard	cytosol	40.85	17.97
TraesCS4A01G061100.1	Wheat	mitochondrion	40.56	15.98
TraesCS1A01G075600.1	Wheat	cytosol	54.08	13.83
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	7.04	2.94
TraesCS5A01G304700.1	Wheat	golgi	6.48	2.92
TraesCS1A01G327400.1	Wheat	plasma membrane	5.63	2.49
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	6.2	2.42
TraesCS2A01G193700.1	Wheat	golgi	5.07	2.29
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	5.35	2.13
TraesCS3A01G397900.1	Wheat	plasma membrane	5.63	2.11
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	5.07	1.73
TraesCS6A01G312000.2	Wheat	plastid	4.23	1.65
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	3.66	1.37
TraesCS1A01G011800.1	Wheat	extracellular	1.97	1.31
TraesCS2D01G190800.1	Wheat	cytosol	0.56	0.49
TraesCS2B01G209600.1	Wheat	cytosol	0.56	0.49
TraesCS2A01G183000.1	Wheat	cytosol	0.56	0.49
Solyc06g069670.2.1	Tomato	nucleus	0.56	0.22
TraesCS5A01G075500.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G388800.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS2A01G182900.1	EnsemblPlantsGene:TraesCS2A01G182900	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	InterPro:IPR014020	InterPro:IPR029021
InterPro:IPR029023	InterPro:Prot-tyrosine_phosphatase-like	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271
PFAM:PF10409	PFscan:PS51181	PFscan:PS51182	SMART:SM01326	SUPFAM:SSF49562	SUPFAM:SSF52799
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:142707925..142709726

Molecular Weight (calculated)

41236.5 Da

IEP (calculated)

6.872

GRAVY (calculated)

-0.305

Length

355 amino acids

Sequence
(BLAST)

001: MALFRKFFLK KTPDRLLEIS ERVYVFDCCF AVEAMGEDEY RDYLSGIVAQ LQDYFPDASF MVSNFWSGDK RSRISDVLSE YDMTVMDYPQ QYEGCPLLQL
101: EMIHHFLKSC ENWLSVEGQQ NMLLMHCERG GWPVLAFMLA GLLLYRKTYT GEHKTLEMVY KQARRDFIQQ FLKLNPQSSH LRYLHYVTRH GSGSEWPPIS
201: RPLILDSVVL HTLPRFDSEG GCRPYLRIHG QDSSPGNKSA KVLFETPKTK KHLQRHGQAE VSVKISASCR VQGDVVLECI HIGEKLDREE TMFRVMFNTA
301: FIQSNVLGLN RDDIDAAWNV NNQFPRDFRA EVLNSPASMP FFNFHFCLSP VHYEI

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.