Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 96.25 | 96.89 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 95.59 | 96.23 |
| HORVU6Hr1G076870.4 | Barley | plastid | 90.74 | 87.83 |
| EES05554 | Sorghum | plasma membrane | 75.41 | 74.35 |
| Zm00001d017983_P001 | Maize | plasma membrane | 73.54 | 72.42 |
| KXG39193 | Sorghum | plastid | 62.4 | 66.43 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 26.13 | 55.76 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 41.9 | 50.13 |
| CDY70125 | Canola | cytosol | 25.47 | 48.12 |
| Bra035415.1-P | Field mustard | cytosol, plasma membrane, plastid | 25.47 | 47.14 |
| Bra024640.1-P | Field mustard | vacuole | 34.51 | 42.07 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 35.17 | 41.97 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 35.94 | 41.53 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.39 | 41.37 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 37.16 | 41.3 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 35.83 | 40.62 |
| Bra016233.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 35.72 | 40.4 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 35.94 | 39.8 |
| CDY31597 | Canola | mitochondrion | 27.89 | 39.78 |
| CDY16239 | Canola | vacuole | 30.65 | 39.6 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 27.34 | 39.49 |
| KRH74702 | Soybean | endoplasmic reticulum | 35.17 | 39.29 |
| KRG99223 | Soybean | golgi, vacuole | 33.52 | 39.28 |
| CDY55061 | Canola | mitochondrion, nucleus | 32.19 | 39.25 |
| KRH45763 | Soybean | endoplasmic reticulum, vacuole | 33.96 | 38.99 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 33.74 | 38.64 |
| KRH69441 | Soybean | golgi, plasma membrane | 34.18 | 38.56 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 22.38 | 38.3 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 31.53 | 38.18 |
| KRH63456 | Soybean | cytosol | 27.45 | 38.13 |
| VIT_17s0000g07570.t01 | Wine grape | nucleus | 35.28 | 37.69 |
| PGSC0003DMT400063186 | Potato | plastid | 31.09 | 37.35 |
| KRH54463 | Soybean | endoplasmic reticulum, golgi | 29.22 | 36.65 |
| CDY33614 | Canola | mitochondrion, nucleus | 30.65 | 36.1 |
| CDY24501 | Canola | mitochondrion, nucleus | 32.19 | 36.09 |
| Bra017889.1-P | Field mustard | nucleus | 30.54 | 35.06 |
| AT1G59910.1 | Thale cress | nucleus | 33.08 | 32.29 |
| TraesCS5A01G304700.1 | Wheat | golgi | 24.15 | 27.83 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 15.66 | 26.64 |
| TraesCS2A01G193700.1 | Wheat | golgi | 22.93 | 26.5 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 25.8 | 26.29 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 21.17 | 23.88 |
| TraesCS2A01G214500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.48 | 23.47 |
| TraesCS5A01G075500.1 | Wheat | cytosol | 7.83 | 23.2 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 24.15 | 23.08 |
| TraesCS6A01G135200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 21.61 | 23.06 |
| TraesCS2A01G337800.1 | Wheat | mitochondrion, plasma membrane | 22.05 | 22.03 |
| TraesCS2A01G183000.1 | Wheat | cytosol | 9.59 | 21.32 |
| TraesCS2A01G388800.1 | Wheat | cytosol | 8.93 | 21.2 |
| TraesCS2A01G044700.1 | Wheat | extracellular, plasma membrane | 24.26 | 21.19 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 17.64 | 11.53 |
| TraesCS4A01G061100.1 | Wheat | mitochondrion | 8.05 | 8.1 |
| TraesCS2A01G182900.1 | Wheat | cytosol, golgi, nucleus | 1.65 | 4.23 |
| TraesCS7A01G148100.1 | Wheat | mitochondrion | 2.43 | 4.01 |
| TraesCS2A01G388700.1 | Wheat | cytosol | 1.98 | 3.71 |
| TraesCS6A01G357300.1 | Wheat | endoplasmic reticulum, golgi | 1.32 | 3.6 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G312000.2 | EnsemblPlantsGene:TraesCS6A01G312000 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF239 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | MapMan:20.2.2.6.1 | : | : |
Description
No Description!
Coordinates
chr6A:+:548401263..548405074
Molecular Weight (calculated)
94675.7 Da
IEP (calculated)
10.430
GRAVY (calculated)
-0.472
Length
907 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSPLLPVL ILLAAALCPL ATGQPPTQRN VQTRFPSTRT PAVAAPPPPI VPPSPSPTGP AVLPPQSASS SSSSSTKRSD IAVAVVSTAL SSFALCGLAF
101: FLFLRHGKKK ELTHAGGNGH SNRPQDAALA GKLPERAPKR PPRGGMVDEN GLDAIYWREF EKEGEGGGGR GRKPAGGWRP PQPPPRQSRA ERWPEAQGSP
201: APSPPRPRKG KIDQEPLIPR GSLDSASAVF DESPRPPSAS SSSSFSVAAP EAYARPPPPA IAVSSIPRPS PPPAPAAPPS ASASLARPPG RGSPPPPPPP
301: MATTSPPPAP KGPPPPPAPK GPPPPPAPKG PPPPPAPRGP PPPPPPGGKK GGPPPPPPPG GKKGGPPPPP AWASSSRPPA APGGPSGADD LAKLKPLHWD
401: KVNVAATDHS MVWDKLTGGS FNLDEGTIEA LFGTAAVNRK TKSADAKDAS SGLGRSTSEE QIFLIEPRKS HNISIILRSL TVGRDEIIDA LRDGNTELGT
501: DVLEKLSRLS ISKEEEATIL KFSGNPDRLA PAEAFLLRLL LDVPNPFARV NALLFKVNYG SEIAVLKQSL QTLEMASQEL RTKGLFFKLL EAVLKAGNRM
601: NAGTARGNAQ AFNLTALRKL NDVKSTDGGT TLLHFVIEEV VRAEGKRLAV NRNYSVRRSG SLSKSSIVGG ISAAGSAGQG PSREDRQNEY LNLGLPIVGG
701: LSSEFANVKK AATVDYDVTA NECAILGNRL VGIKKLLETC GDDGFSRGLR GFVNAAEQEL KALSGVQEKV LDLVQRTTEY YHAGATKDRN AHPLQLFVIV
801: RDFLGMVDQA CVDIKRRLQQ QKKPTPPSSQ QTTAAASTAA KGPAEAAKGA ADGAKAVAGG AAAAPPAHKP PPEEADSKRK RVMPRFPNLP AHFMKDGADS
901: DSSSDEE
101: FLFLRHGKKK ELTHAGGNGH SNRPQDAALA GKLPERAPKR PPRGGMVDEN GLDAIYWREF EKEGEGGGGR GRKPAGGWRP PQPPPRQSRA ERWPEAQGSP
201: APSPPRPRKG KIDQEPLIPR GSLDSASAVF DESPRPPSAS SSSSFSVAAP EAYARPPPPA IAVSSIPRPS PPPAPAAPPS ASASLARPPG RGSPPPPPPP
301: MATTSPPPAP KGPPPPPAPK GPPPPPAPKG PPPPPAPRGP PPPPPPGGKK GGPPPPPPPG GKKGGPPPPP AWASSSRPPA APGGPSGADD LAKLKPLHWD
401: KVNVAATDHS MVWDKLTGGS FNLDEGTIEA LFGTAAVNRK TKSADAKDAS SGLGRSTSEE QIFLIEPRKS HNISIILRSL TVGRDEIIDA LRDGNTELGT
501: DVLEKLSRLS ISKEEEATIL KFSGNPDRLA PAEAFLLRLL LDVPNPFARV NALLFKVNYG SEIAVLKQSL QTLEMASQEL RTKGLFFKLL EAVLKAGNRM
601: NAGTARGNAQ AFNLTALRKL NDVKSTDGGT TLLHFVIEEV VRAEGKRLAV NRNYSVRRSG SLSKSSIVGG ISAAGSAGQG PSREDRQNEY LNLGLPIVGG
701: LSSEFANVKK AATVDYDVTA NECAILGNRL VGIKKLLETC GDDGFSRGLR GFVNAAEQEL KALSGVQEKV LDLVQRTTEY YHAGATKDRN AHPLQLFVIV
801: RDFLGMVDQA CVDIKRRLQQ QKKPTPPSSQ QTTAAASTAA KGPAEAAKGA ADGAKAVAGG AAAAPPAHKP PPEEADSKRK RVMPRFPNLP AHFMKDGADS
901: DSSSDEE
001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
Arabidopsis Description
FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.