Factsheet for Bra016233.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	93.52	96.65
AT1G70140.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	75.19	79.34
Bra024640.1-P	Field mustard	vacuole	68.33	73.66
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	34.91	57.14
GSMUA_Achr6P04430_001	Banana	cytosol	28.3	53.41
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	51.37	50.49
PGSC0003DMT400058304	Potato	plasma membrane	49.25	49.38
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	48.01	49.04
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	49.25	48.23
KRG99223	Soybean	golgi, vacuole	42.77	44.32
KRH45763	Soybean	endoplasmic reticulum, vacuole	43.27	43.92
Bra017889.1-P	Field mustard	nucleus	42.89	43.54
KRH69441	Soybean	golgi, plasma membrane	43.14	43.03
KRH74702	Soybean	endoplasmic reticulum	43.52	42.98
GSMUA_Achr8P22610_001	Banana	plasma membrane	39.4	41.69
EES05554	Sorghum	plasma membrane	42.52	37.07
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	40.77	36.29
KXG39193	Sorghum	plastid	38.53	36.27
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	40.52	36.07
TraesCS6A01G312000.2	Wheat	plastid	40.4	35.72
Bra012246.1-P	Field mustard	cytosol	8.73	35.71
Bra029655.1-P	Field mustard	cytosol	13.47	35.64
Zm00001d017983_P001	Maize	plasma membrane	40.77	35.5
HORVU6Hr1G076870.4	Barley	plastid	40.77	34.9
Bra001256.1-P	Field mustard	plastid	15.59	32.81
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	28.3	27.82
Bra029012.1-P	Field mustard	plasma membrane	28.43	26.54
Bra002969.1-P	Field mustard	plasma membrane	28.55	26.11
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	28.93	25.86
Bra039561.1-P	Field mustard	golgi	26.93	25.81
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	25.81	25.27
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	26.56	24.85
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	27.56	24.69
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	24.56	23.94
Bra031838.1-P	Field mustard	cytosol	12.22	22.27
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	28.55	20.99
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	20.57	20.45
Bra038438.1-P	Field mustard	extracellular	7.23	19.14
Bra023204.1-P	Field mustard	cytosol	18.83	12.98
Bra007822.1-P	Field mustard	cytosol	16.46	11.81
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	17.96	11.64
Bra002668.1-P	Field mustard	cytosol	16.83	10.45
Bra005952.1-P	Field mustard	nucleus	18.45	10.0
Bra020385.1-P	Field mustard	cytosol	16.21	9.31
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.7	9.22
Bra009307.1-P	Field mustard	cytosol	8.23	8.18
Bra020386.1-P	Field mustard	cytosol	3.99	7.02

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	EnsemblPlantsGene:Bra016233	EnsemblPlants:Bra016233.1	EnsemblPlants:Bra016233.1-P	ncoils:Coil
InterPro:FH2_Formin	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005522	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005911	GO:GO:0008150	GO:GO:0009653	GO:GO:0009932
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0040007
GO:GO:0045010	GO:GO:0051015	InterPro:IPR015425	UniProt:M4DIA6	PFAM:PF02181	PFscan:PS51444
PANTHER:PTHR23213	PANTHER:PTHR23213:SF239	SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002541985	SEG:seg	:	:	:	:

Description

AT1G70140 (E=3e-196) ATFH8 | ATFH8 (formin 8); actin binding / actin filament binding / profilin binding

Coordinates

chrA07:-:18713686..18716094

Molecular Weight (calculated)

87648.8 Da

IEP (calculated)

10.075

GRAVY (calculated)

-0.458

Length

802 amino acids

Sequence
(BLAST)

001: MAAMLHQPWP FPLQVTILLF LCVVVLPYHS FSQSDSPQNI ETFYPTAELS PVPPPINPST PSSPPSNQSS SSDRGTITKA VLITAASTVV LAAAFFFFLQ
101: KCVIARRRRR RENRINVQNT LPPYPPTTTT VAATETLARE GFTRFGGVKG LILDENGLDV LYWRNLQSQR QRRSGSFRKE IVVAGGEEGG SEEKEVIYYK
201: NKKKMEQVTE VPLLRGRSST SHSIIHNDSY ELESPPPPPP PPSIPAKKTV PAPSPPPKKG PSPPPPPIPV NKTAPPPPPP PSPPPTPMKK TAPAPPPPRP
301: SPSPPPPPPV KKAAALSSSG SRPPPAPRGS SGGESSRGGG SGQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEHDKQKS
401: NSPTKIFILD PRKSQNSAIV LKSLGMTREE LVEALVEGHD FVPETLERLA RIAPTKEEQS AILEFDGGDA GKLADAEAFL FHLLKAVPTA FTRLNAFLFR
501: ANYYPEIAHH GRSLQTLDLA CKELRSRGLF VKLLEAILKA GNRMNAGTAR GNAQAFNLTA LLKLSDVKSV DGKTTLLNFV VEEVVRSEGK RCVLNRRSNS
601: LTRSNSNRSS SSSSSNNAPQ AMSKEEQEKE FLKLGLPIVG GLSSEFSNVK KAASVDYDTI VATCSALAVR AKDARKVIAQ CEGGRFVEKM MTFLDSVEEE
701: VKTAREEERK VMELVKRTTE YYQAGASVKG KNPLHLFVIV RDFLAMVDKV CLDIMRNVQR RKVTSSSEST STQRNAVKFP VLPPNFMSDR SRSDSGESDS
801: DM

Best Arabidopsis Sequence Match ( AT1G70140.1 )
(BLAST)

001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM

Arabidopsis Description

FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.