Factsheet for Bra028684.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40774	Canola	cytosol	54.33	94.95
Bra005952.1-P	Field mustard	nucleus	76.89	84.53
PGSC0003DMT400063143	Potato	cytosol	15.12	78.34
AT5G07740.2	Thale cress	nucleus	78.49	75.88
Solyc03g115680.2.1	Tomato	plastid	23.42	73.27
KRH03521	Soybean	plastid	29.93	71.94
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	54.39	71.54
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	19.67	69.26
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	4.98	65.85
Zm00001d030781_P001	Maize	cytosol	4.24	64.49
TraesCS5D01G089100.1	Wheat	cytosol	11.99	63.73
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	51.87	63.51
KRH54596	Soybean	extracellular	48.92	61.85
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	18.38	61.52
KRH56878	Soybean	cytosol	44.07	59.4
Bra038438.1-P	Field mustard	extracellular	10.51	56.44
KRH63288	Soybean	cytosol	32.58	56.03
KRH03523	Soybean	cytosol	24.34	55.7
Zm00001d030780_P001	Maize	cytosol	5.84	53.37
Solyc07g005500.2.1	Tomato	cytosol	16.9	49.73
Bra007822.1-P	Field mustard	cytosol	33.19	48.3
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	31.9	47.97
Bra020386.1-P	Field mustard	cytosol	13.34	47.59
Bra023204.1-P	Field mustard	cytosol	33.99	47.55
GSMUA_Achr6P16780_001	Banana	cytosol	34.17	47.4
Os07t0596300-02	Rice	plastid	45.61	45.61
OQU90190	Sorghum	cytosol	45.67	45.25
Bra002668.1-P	Field mustard	cytosol	34.91	43.96
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	45.79	43.85
Zm00001d006758_P003	Maize	cytosol	42.9	43.06
Bra009307.1-P	Field mustard	cytosol	19.98	40.27
Bra020385.1-P	Field mustard	cytosol	34.05	39.68
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	38.84	36.2
HORVU5Hr1G020180.51	Barley	mitochondrion	41.86	34.91
KXG23793	Sorghum	cytosol	41.24	33.28
Zm00001d041515_P003	Maize	mitochondrion	42.96	32.66
Os04t0245000-00	Rice	plasma membrane	22.0	28.19
Bra029655.1-P	Field mustard	cytosol	4.24	22.77
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	10.02	19.98
Bra001256.1-P	Field mustard	plastid	4.67	19.95
Bra029012.1-P	Field mustard	plasma membrane	10.39	19.67
Bra039561.1-P	Field mustard	golgi	10.08	19.59
Bra024640.1-P	Field mustard	vacuole	8.85	19.35
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	10.63	19.29
Bra002969.1-P	Field mustard	plasma membrane	10.39	19.27
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	9.53	18.93
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	5.65	18.78
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	9.22	18.7
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	9.71	17.65
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	9.22	17.5
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	8.79	17.38
Bra012246.1-P	Field mustard	cytosol	2.03	16.84
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.12	16.59
Bra017889.1-P	Field mustard	nucleus	7.5	15.44
Bra031838.1-P	Field mustard	cytosol	4.0	14.77
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	6.33	12.76

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra028684	EnsemblPlants:Bra028684.1
EnsemblPlants:Bra028684.1-P	ncoils:Coil	InterPro:FH2_Formin	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:M4EIR9	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0002543258
SEG:seg	:	:	:	:	:

Description

AT5G07770 (E=3e-146) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA02:-:2564374..2571652

Molecular Weight (calculated)

175313.0 Da

IEP (calculated)

7.652

GRAVY (calculated)

-0.668

Length

1627 amino acids

Sequence
(BLAST)

0001: MALFRRFFYK KPPDHLLEIS ERLYVFDCCF SSDVMGEDEY KLYLGGIVAQ LQDHFPDASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYETCPLLPL
0101: EMIHHFLKSS ESWLSLEGQQ NVLLMHCEKG GWPVLAFMLS GLLLYRKQYQ GEQKTLEMVH KQAPKELLHI LSPLNPQPSQ LRYLQYISRR NLTSDWPPSD
0201: TPLLLDCLIL RDLPHFEGLK GCRPIIRVYG QDPKSKANRS SVVLFSTPKT NKHTRLYQQE ECILVKLDIQ CRVQRDVVLE CIHLHDDLVR EEMVFRIMFH
0301: TAFVRGNILI VERDEMDILW DAKDQFPKEF KAEVLFSGAD TVVPAIATAP VSDDDDENDF DMASPEEFYE VEEIFSDAID GHDLKREDSD SFVVVDSASD
0401: DSEGKEVWKG DVEPNAFLDC ASDDSNHKHE ASVDPVKDIT VDDVQYRSDG KADTNDSVKD IGIDDSDEQR KRTVEAKEND SRTEESQQNG DGEESTAQKA
0501: NADLNISVSD KTKAAPRKVV GANAKPAGDS VKPKSKQQET QGGNVRMAKP NAVSRWIPSN KGSYKDSMHV AYPPTRTNSA PASITTSLKD GKRATSPDGV
0601: VTKDAKTKYL RATVSSSDIM RSRTPIWLSP DSSPKDKPPS LPVSPHHAPP TPQHPPATPS LPSLTSEATS TSQIPEPPPF PSERLNSGTT LPPPPPPPPS
0701: APPPPPPFAS EKPNNRTVLQ PSLPWKSVYT STLATSTACS TSQPPPPPPP PPWKPGYASI LETHEEGSTS YNSPPPPPPP PPPPPPPFSS SNTTKSSGGH
0801: IPTPSPLPYM SIAPSPSPKT SLINGFSAAP PPPPPPPPPP LPPFSKAHSV PIPPPPPPSY GSPTAPPFGH VSSVPPPPQP PSHGAPPPPP PPPPPPFGHV
0901: GSIHQPPSHG APPPPPPPPP PPPSPFGHVG SIPQPPSHGA PPPPPPPPPP PPFGYTRHPP PPPPPPFGSA GPPPPPPPPF GKTSPPPPPP PPFGSTRPPP
1001: PPPPPPFGKT SPPPPPPPPF GSSRPPPPPP PPFGSNGPPP PPPPPFRSGG PPPPPPPPFG STGPPPPPPP PFRSGGPPPP PPPPFGTSGP PPPPPPPFRS
1101: GGPPPPPPPP GGAPPPPPPP MRGGAPPPPP PPMRGGAPPP PRPPMRGGAP PPPPPPGGRA PGPPPPPPPG GRAPGPPPPP GPRPPGGPPP PPGPRPPGAP
1201: PDLKGAGRGR GLARPGLGSS APKKSSLKPL HWVKVTRALQ GSLWDELQRQ GQTAPEFDVS EIETLFSAIV PKPVDKAGGR RKSVGAKPEK IQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDDTVLDI DQIENLIKFC PTKEEMELLK NYTGDKATLG KCEQYFLELM KVPRVESKMR VFSFKIQFGT QIKEFKKSLN
1401: AVNSACDEVR TSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLLKLS DTRAANSKMT LMHYLCKVLA SKGSDLLDFH KDLGSLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSEVFRK TLKDFISVAT TEVATVSSLY SVVGNNADAL AYYFGEDPKR CPFEQVTATL LNFIRLFKKA HEENIKQEEL
1601: EKKKAAKEAE MEKAKGVSLT KKPVDDS

Best Arabidopsis Sequence Match ( AT5G07740.3 )
(BLAST)

0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS

Arabidopsis Description

actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.