Factsheet for GSMUA_Achr3P30260_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	35.58	79.22
PGSC0003DMT400063143	Potato	cytosol	21.81	75.16
GSMUA_Achr1P25960_001	Banana	mitochondrion	13.49	69.52
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	6.93	60.98
GSMUA_Achr5P13600_001	Banana	extracellular	15.62	56.9
GSMUA_Achr1P25980_001	Banana	plasma membrane	14.79	56.54
CDY40774	Canola	cytosol	44.92	52.2
AT5G07780.1	Thale cress	plastid	21.63	50.43
KRH03521	Soybean	plastid	29.76	47.56
GSMUA_Achr6P16780_001	Banana	cytosol	50.09	46.21
GSMUA_Achr3P04690_001	Banana	cytosol	46.77	44.42
KRH56878	Soybean	cytosol	47.04	42.17
CDY14029	Canola	cytosol	47.97	42.16
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	26.62	42.11
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	51.66	42.06
KRH54596	Soybean	extracellular	49.45	41.57
CDX99025	Canola	cytosol	44.36	41.17
CDX69994	Canola	plastid	44.55	40.61
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	33.73	39.21
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	44.45	38.88
CDX81069	Canola	nucleus	48.34	36.02
Bra020386.1-P	Field mustard	cytosol	15.16	35.96
Bra005952.1-P	Field mustard	nucleus	48.24	35.27
CDX78309	Canola	nucleus	48.43	35.0
CDY02798	Canola	cytosol	15.62	34.49
AT5G07770.3	Thale cress	plastid	22.92	34.02
CDX69993	Canola	cytosol	37.71	33.64
KRH03523	Soybean	cytosol	22.0	33.47
GSMUA_Achr3P13420_001	Banana	cytosol	19.04	33.23
KRH63288	Soybean	cytosol	28.93	33.09
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	52.03	32.25
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.97	31.9
CDX99026	Canola	cytosol	37.34	31.79
AT5G07740.2	Thale cress	nucleus	48.8	31.37
AT5G07650.1	Thale cress	cytosol	22.46	29.82
GSMUA_Achr1P25970_001	Banana	cytosol	19.41	28.15
AT5G07760.2	Thale cress	cytosol, plastid	22.46	28.03
GSMUA_Achr5P13590_001	Banana	cytosol	23.2	27.28
GSMUA_Achr7P26240_001	Banana	cytosol	7.67	25.08
GSMUA_Achr11P...	Banana	mitochondrion, plastid	9.89	24.88
GSMUA_Achr5P25760_001	Banana	mitochondrion	9.06	22.32
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	9.52	20.72
GSMUA_Achr4P07090_001	Banana	cytosol	8.78	20.65
GSMUA_Achr7P18740_001	Banana	nucleus	9.61	20.39
GSMUA_Achr6P18370_001	Banana	nucleus	9.98	19.18
GSMUA_Achr6P04430_001	Banana	cytosol	7.49	19.06
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	11.18	18.64
GSMUA_Achr2P14090_001	Banana	mitochondrion	10.54	17.14
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	10.54	15.77
GSMUA_Achr8P22610_001	Banana	plasma membrane	10.35	14.78
GSMUA_Achr10P...	Banana	plastid	10.91	14.69
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	11.0	14.18
GSMUA_Achr7P23740_001	Banana	plastid	12.01	10.84

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	ncoils:Coil	InterPro:FH2_Formin
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr3G30260_001	EnsemblPlants:GSMUA_Achr3P30260_001	EnsemblPlants:GSMUA_Achr3T30260_001
InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021	UniProt:M0SJ40	PFAM:PF02181	PFAM:PF10409
PFscan:PS51182	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498
SMART:SM01326	SUPFAM:SSF101447	SUPFAM:SSF49562	TMHMM:TMhelix	InterPro:Tensin_C2-dom	UniParc:UPI000294FFF2
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G30260_001]

Coordinates

chr3:-:29065951..29082633

Molecular Weight (calculated)

122464.0 Da

IEP (calculated)

6.241

GRAVY (calculated)

-0.383

Length

1082 amino acids

Sequence
(BLAST)

0001: MALFRRLFYR KPPDRLLEIS ERVYVQNSKC LTVLFVAVFD CCFSAETLGE NDYKDYMDGI VTQLHDYFPD ASFMVFNFKE GDKRSQISDI LTESDMTVMD
0101: YPLQYEGGCW PVLAFMLAGL LLYRKQYTGE QKTLEMVNKQ APKELHHLLS PLNPQPSHLR YLQYISRRGN APEWPPKDIS FTLECLILRI VPNFDGEGGC
0201: RPMVRIYGQD PLAPNSRSSK ILFSTSKTKK HIRHYKQAEA TPVKLKTRCR VQGDVVVECI HVDKDLEHEE IMFRIMFNTA FVHSSILMLS REEIDVVWNA
0301: KDQFSRDFKA DVIFSDFDSF ESDSSTDTLV EDGDETEGAF TEAEDFFEAE EIFTNSYSHN ANRDPKESST LRQNTVTSMD EKQKLIKINN VKQETDNGMG
0401: LVIMTENLID LETAETIESI WENNDSNNGS ENIIGRRPNA VDEIPSPEKH NLEKEIDSST DQDKVEHHSE SMLSSPTVAE DRMTKFSTIA VSTPPRAPGA
0501: PPPPPSSSLS DARGLLPNGG RGRGLSRSMG VNSANLTSRR LSLKPLHWVK VTLAVEGSLW DELQRSGDAL SASDFDVSEL ESLFAAMVPK TGDSSKEARR
0601: KSLGSQSDKV HLGAYERNMK SGKEPAGERK QLTIFNAIVE NIYFFSCILF LLSLLSLLLL FFCSLLLYLL IKYSRAAAES QWDSSVLDSL SSFYSPLLLS
0701: FPFQLEKHQW HAPYCFSSSF PATIALRRSN NTEIMLTKIK MPLPDLMSAA LALDDSILDV DQVENLIKFC PTKEEMDLLK GYTGDKEKLG KCEQFFLELM
0801: KVPRVESKLR VFSFKIQFGS QVSDLKKSLS SIDSACEQIR NSIKLKEIMK KILFLGNTIN QGTARGSAIG FHLDSLLKLS DTRATNNKMT LMHYLCKSLA
0901: SRSPHLLDFH EDLISLEATS KIQLKSLAEE MQAIVKGLRK VEVELKASEN DGPASEIFCK TLKEFVVVAE AEVRSLTTLY TSVGRNADAL VLYFGENPAK
1001: CPLEQVLSTL LNFILMFKRA HQENCQQAEL EKKKAQKARE MEKPKSSLSN SKNDLKERSL SQQLQETKQK TKSTYRREKD IR

Best Arabidopsis Sequence Match ( AT5G07650.2 )
(BLAST)

001: MSLVEISGSD AMAAPMPGRV PPPPPRPPPM PRRLPPMFDA FDHTGAGMVW GFPRPAKKRA SLKPLHWVKI TSDLQGSLWD ELQRRHGDSQ TAIELDISEL
101: ETLFFVEAKP EKIRLHDLRR ASYRVFNVRS YYMRANNKVI NLSMPLPDMM TAVLAMDESV VDVDQIEKLI KFCPTNEEME LLKTYTGDKA ALGKYEQYLL
201: ELMKVPRLEA KLRVFSFKTQ FGTKITELKE RLNVVTSACE EVRSSEKLKE IMKKIPCLGN TSNQGPDRGK SSVVDKNLSF SSGIQLKEIM KKIPCLGNTS
301: KSNPRVGVKL DSSVSDTHTV KSMHYYCKVL ASEASELLDV YKDLQSLESA SKIQVKSLAQ NIQAIIKRLE KLKQELTASE TDGPASEVFC NTLKDFISIA
401: ETEMATVLSL YSVVRKKADA LPPYFGEDPN QCPFEQLTMT LFNFIKLFKK AHEENVKQAD LEKKKAMKQI DLRRANDTEI MLTKVNIPLA DMMAAVLGMD
501: EYVLDVDQIE NLIRFCPTKE EMELLKNYTG DKATLGKCEQ YFLEVMKVPG VESKLRAFSF KIQFGTQIAE LNKGLNAVNS ACEEVRTSEK LKEIMANILC
601: MGNILNQGTA EGSAVGFKLK SLLILSDTCA PNSKMTLMHY LCKVLASKAS DLLDFHKDLE SLESASKIQL KSLAEEIQAI TKGLEKLNKQ LTASESDGPV
701: SQVFRKVLKD FISMAETQVA TVSSLYSSVG KNADALAHYF GEDPNHYPFE KVTTTLLSFI RLFKKAHEEN VKQADLDKNK DAKEAEMEKT K

Arabidopsis Description

Actin-binding FH2 protein [Source:TAIR;Acc:AT5G07650]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.