Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P25980_001 | Banana | plasma membrane | 33.71 | 73.85 |
| Solyc07g005500.2.1 | Tomato | cytosol | 47.1 | 52.8 |
| TraesCS2A01G388700.1 | Wheat | cytosol | 33.55 | 42.89 |
| TraesCS2D01G386500.1 | Wheat | cytosol | 33.23 | 42.47 |
| GSMUA_Achr3P04690_001 | Banana | cytosol | 51.77 | 28.18 |
| GSMUA_Achr5P13590_001 | Banana | cytosol | 38.87 | 26.2 |
| GSMUA_Achr7P26420_001 | Banana | cytosol, mitochondrion | 38.87 | 25.89 |
| GSMUA_Achr1P25970_001 | Banana | cytosol | 27.74 | 23.06 |
| GSMUA_Achr6P16780_001 | Banana | cytosol | 38.39 | 20.29 |
| GSMUA_Achr3P30260_001 | Banana | mitochondrion, plasma membrane | 33.23 | 19.04 |
| GSMUA_Achr4P32680_001 | Banana | cytosol, mitochondrion | 39.35 | 13.97 |
| PGSC0003DMT400079305 | Potato | cytosol, mitochondrion, plastid | 16.77 | 13.3 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 6.94 | 5.95 |
| GSMUA_Achr2P14090_001 | Banana | mitochondrion | 5.81 | 5.41 |
| GSMUA_Achr10P... | Banana | plastid | 6.94 | 5.35 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 7.1 | 5.24 |
| GSMUA_Achr7P26410_001 | Banana | endoplasmic reticulum, golgi | 3.23 | 4.12 |
| GSMUA_Achr3P23040_001 | Banana | cytosol, mitochondrion, plastid | 3.87 | 3.7 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 6.94 | 3.59 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 4.03 | 3.3 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 2.26 | 3.26 |
| GSMUA_Achr3P13430_001 | Banana | plasma membrane, plastid | 3.06 | 2.78 |
| GSMUA_Achr5P13600_001 | Banana | extracellular | 1.29 | 2.69 |
| GSMUA_Achr7P18740_001 | Banana | nucleus | 2.1 | 2.55 |
| GSMUA_Achr1P25960_001 | Banana | mitochondrion | 0.81 | 2.38 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 1.45 | 2.05 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 1.77 | 1.95 |
| TraesCS2A01G388800.1 | Wheat | cytosol | 0.65 | 1.05 |
| TraesCS2D01G386600.1 | Wheat | cytosol | 0.65 | 1.04 |
| GSMUA_Achr8P07370_001 | Banana | endoplasmic reticulum, golgi | 0.65 | 0.8 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 0.48 | 0.65 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 0.32 | 0.6 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 0.16 | 0.24 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P13420_001 | EnsemblPlants:GSMUA_Achr3T13420_001 | EnsemblPlantsGene:GSMUA_Achr3G13420_001 | Gene3D:2.60.40.1110 | Gene3D:3.90.190.10 | InterPro:IPR014020 |
| InterPro:IPR029021 | InterPro:IPR029023 | InterPro:Prot-tyrosine_phosphatase-like | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF271 | PFAM:PF10409 | PFscan:PS51181 | PFscan:PS51182 | SEG:seg | SMART:SM01326 |
| SUPFAM:SSF49562 | SUPFAM:SSF52799 | UniParc:UPI0002969049 | UniProt:M0SEA9 | MapMan:35.1 | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr3G13420_001]
Coordinates
chr3:+:9881390..9884158
Molecular Weight (calculated)
69966.5 Da
IEP (calculated)
4.688
GRAVY (calculated)
-0.279
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMFRKFFYR KPPDGLLEIS ERVYVFDCCF TTDILEEKEY RVYMGGIVSQ LHEQYPDASF MVFNFREGES QSQISSVLSE YDMLVMDYPR QYEGCPLLTM
101: EMIHHFLRSG ESWLSLGQQN LLLMHCDRGG WPVLAFMLAA LLVYHKQYTG EQRTLDMIYK QAPRELLQLL SPLNPLPSQL RYLHYISRRN VAMEWPPLDR
201: ALTLDCIILR FIPDLNGTGG CRPIFRIYGQ DPFIASDQTP KVLFSTPKKS KLVRFFKQED CELVKIDIHC HIQGDIVLEC ISLDEDLIRE VMMFRVMFNT
301: AFIRSNILML DRDAIDILWD AKDRFPKDFR VEVLLSEMDA ADPLISSELT SGEEKDGLPI EAFAKVQELF NNWDWLETNV DAATKVLQQI SSSKNLQEKL
401: DAMSPQKFDA DVKLKRTSYD VLREELQLGE TDDDGNKKSL LSSPKEQSAP LDEGSDSITE SQNVELDGLQ MSAQCPSRIE QIPASPSTPA FSSDSPQVPG
501: SDATVSRYHS SPSSLGVITP LHDHQLTSSA SHIKDTSHAS PSPPLSPLPP AAAAESDAET TLKPTAVAEV PSLTTESSIP EVPPSPAPEL STPTPHTFEH
601: HPPLSLLAWK NLLLLQLHIR
101: EMIHHFLRSG ESWLSLGQQN LLLMHCDRGG WPVLAFMLAA LLVYHKQYTG EQRTLDMIYK QAPRELLQLL SPLNPLPSQL RYLHYISRRN VAMEWPPLDR
201: ALTLDCIILR FIPDLNGTGG CRPIFRIYGQ DPFIASDQTP KVLFSTPKKS KLVRFFKQED CELVKIDIHC HIQGDIVLEC ISLDEDLIRE VMMFRVMFNT
301: AFIRSNILML DRDAIDILWD AKDRFPKDFR VEVLLSEMDA ADPLISSELT SGEEKDGLPI EAFAKVQELF NNWDWLETNV DAATKVLQQI SSSKNLQEKL
401: DAMSPQKFDA DVKLKRTSYD VLREELQLGE TDDDGNKKSL LSSPKEQSAP LDEGSDSITE SQNVELDGLQ MSAQCPSRIE QIPASPSTPA FSSDSPQVPG
501: SDATVSRYHS SPSSLGVITP LHDHQLTSSA SHIKDTSHAS PSPPLSPLPP AAAAESDAET TLKPTAVAEV PSLTTESSIP EVPPSPAPEL STPTPHTFEH
601: HPPLSLLAWK NLLLLQLHIR
0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
Arabidopsis Description
Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.