Factsheet for GSMUA_Achr7P18740_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26240_001	Banana	cytosol	30.39	46.83
GSMUA_Achr11P...	Banana	mitochondrion, plastid	34.31	40.7
GSMUA_Achr4P07090_001	Banana	cytosol	36.27	40.22
CDY05170	Canola	extracellular, golgi, plasma membrane	58.04	39.73
CDY27766	Canola	golgi, plasma membrane, vacuole	59.22	37.94
CDX74146	Canola	extracellular, golgi, plasma membrane	59.61	37.86
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	59.61	37.21
GSMUA_Achr5P25760_001	Banana	mitochondrion	31.96	37.13
KRG96818	Soybean	plasma membrane	57.45	37.04
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	59.41	37.0
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	59.22	36.7
KRH68527	Soybean	plasma membrane	55.29	35.47
KRG92894	Soybean	endoplasmic reticulum, vacuole	61.37	35.09
GSMUA_Achr6P18370_001	Banana	nucleus	38.63	34.99
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	59.41	34.28
KRH33895	Soybean	plasma membrane	61.57	34.17
Solyc01g099650.2.1	Tomato	nucleus	60.0	33.89
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	32.94	33.8
PGSC0003DMT400063542	Potato	extracellular, golgi, plasma membrane	59.22	33.56
VIT_14s0060g02330.t01	Wine grape	golgi, plasma membrane, vacuole	62.94	33.51
GSMUA_Achr6P04430_001	Banana	cytosol	27.06	32.47
Zm00001d032225_P001	Maize	golgi	51.96	29.71
EES13879	Sorghum	golgi	52.75	29.63
Os08t0431200-00	Rice	cytosol	28.82	28.27
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	34.9	27.43
GSMUA_Achr8P22610_001	Banana	plasma membrane	37.65	25.33
GSMUA_Achr10P...	Banana	plastid	39.8	25.28
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	34.71	24.48
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	38.63	23.48
GSMUA_Achr2P14090_001	Banana	mitochondrion	30.59	23.46
GSMUA_Achr1P25960_001	Banana	mitochondrion	9.02	21.9
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	19.41	20.37
GSMUA_Achr5P13600_001	Banana	extracellular	11.76	20.2
GSMUA_Achr7P23740_001	Banana	plastid	39.41	16.76
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	21.76	16.23
GSMUA_Achr3P04690_001	Banana	cytosol	24.12	10.8
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	20.39	9.61
GSMUA_Achr6P16780_001	Banana	cytosol	20.98	9.12
GSMUA_Achr1P25970_001	Banana	cytosol	12.16	8.31
GSMUA_Achr5P13590_001	Banana	cytosol	11.57	6.41
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	21.37	6.24
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	10.0	5.48
GSMUA_Achr1P25980_001	Banana	plasma membrane	1.76	3.18
GSMUA_Achr3P13420_001	Banana	cytosol	2.55	2.1

Protein Annotations

EnsemblPlants:GSMUA_Achr7P18740_001	EnsemblPlants:GSMUA_Achr7T18740_001	EnsemblPlantsGene:GSMUA_Achr7G18740_001	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF177	PFAM:PF02181	PFscan:PS51444	SEG:seg
SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI0002963819	UniProt:M0TIR1	MapMan:20.2.2.6.1	:

Description

Predicted protein (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G18740_001]

Coordinates

chr7:-:21571799..21573799

Molecular Weight (calculated)

56344.8 Da

IEP (calculated)

8.149

GRAVY (calculated)

-0.458

Length

510 amino acids

Sequence
(BLAST)

001: MASVESSPSD ELKSSPAPSK ADLLSTAESA AKEPMTCPHQ SKSVSPDGNG NGKAGFSPPM PLVSNGRIPK PPGPPPLPPP PPIRPPPFPK GCSSGHAPPP
101: PPCPAQLSTP VGKDGTPLPK LKPLHWDKVR AAPDRSMVWD KIRSSSFEFD EKMIESLFGY NLRSSSRTEE GKSKTPSPSK HVMEHKRLQN ITILMKALNA
201: NAEQVRNALT LGEGLTVQQL EALVKMAPTK EEEEKLSNVE GNDDELDPAE KFLKAVLQVS FTFQRSEVMF YRETFEDEVA HLRNSFAMIE EACKELRSSR
301: LFFRLLEAVL KTGNRMNVGT IRGGARAFKL DALLKLADVK GTDGKTTLLH FVVQEIVRLE EDHRATGLKL VSGLITELGN VKKTASMDLD VLISSVSNLS
401: SGLSQSKQLV EQDMTVDDKS KRFVHRMRSF LNEAEKIVKE LKDDENQVLL QVRNIAEYYH GDVSKDEANP LRIFVIVRDF LCMLDRVCKE VGNSKTHQGP
501: ISLLLLDRRG

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [extracellular,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.