Factsheet for GSMUA_Achr2P11400_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion, plastid	38.31	64.42
GSMUA_Achr7P26240_001	Banana	cytosol	27.11	59.21
GSMUA_Achr5P25760_001	Banana	mitochondrion	35.68	58.77
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	67.63	58.28
GSMUA_Achr6P18370_001	Banana	nucleus	38.17	49.02
PGSC0003DMT400056393	Potato	cytosol	32.5	48.96
GSMUA_Achr4P07090_001	Banana	cytosol	26.69	41.96
GSMUA_Achr10P...	Banana	plastid	46.33	41.72
VIT_05s0094g00920.t01	Wine grape	nucleus	51.04	39.68
KRH71295	Soybean	vacuole	47.44	38.98
Bra029655.1-P	Field mustard	cytosol	16.32	38.94
VIT_00s0227g00200.t01	Wine grape	cytosol	8.16	38.56
KRH50174	Soybean	vacuole	47.16	38.06
Solyc12g019480.1.1	Tomato	nucleus	46.61	37.95
Solyc08g014430.2.1	Tomato	nucleus	39.56	37.78
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	39.28	37.62
PGSC0003DMT400013717	Potato	plastid	44.4	37.28
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	46.33	36.85
KRH47952	Soybean	cytosol	39.42	36.73
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	47.72	36.55
CDX79799	Canola	mitochondrion, plastid, vacuole	39.83	36.27
CDY17909	Canola	golgi, vacuole	42.46	36.2
Solyc06g082910.2.1	Tomato	extracellular	46.61	36.0
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	42.46	35.82
CDX83457	Canola	golgi, plasma membrane, vacuole	41.63	35.71
AT3G25493.1	Thale cress	vacuole	7.88	35.62
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	43.85	35.46
CDY44259	Canola	plasma membrane, vacuole	41.22	35.35
GSMUA_Achr7P18740_001	Banana	nucleus	24.48	34.71
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	51.18	34.29
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	41.77	33.74
KRH00989	Soybean	extracellular, golgi, vacuole	48.27	33.59
KRH40232	Soybean	endoplasmic reticulum, extracellular	48.13	33.56
Bra001256.1-P	Field mustard	plastid	17.57	33.33
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.75	31.92
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	47.3	31.78
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	46.06	31.68
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	21.72	31.59
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	47.3	31.35
AT5G48360.1	Thale cress	extracellular, vacuole	33.61	31.07
GSMUA_Achr2P14090_001	Banana	mitochondrion	28.08	30.53
CDX86310	Canola	endoplasmic reticulum, plasma membrane	33.2	29.74
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	33.06	29.62
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	26.56	29.58
GSMUA_Achr7P23740_001	Banana	plastid	48.96	29.52
CDY35941	Canola	plastid	30.57	29.51
TraesCS1D01G010200.1	Wheat	plastid	23.1	29.4
CDX85333	Canola	plasma membrane	33.33	29.28
GSMUA_Achr6P04430_001	Banana	cytosol	17.15	29.18
TraesCS1B01G059400.1	Wheat	plastid	22.41	28.77
CDY28040	Canola	plastid	30.57	28.7
Bra012246.1-P	Field mustard	cytosol	7.61	28.06
CDX74041	Canola	golgi, plasma membrane, plastid	27.66	28.05
TraesCS1A01G011800.1	Wheat	extracellular	20.61	27.95
HORVU1Hr1G002300.8	Barley	plastid	27.8	27.76
CDY07990	Canola	golgi, plasma membrane, plastid	27.11	27.15
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	31.12	27.11
AT3G07540.1	Thale cress	plasma membrane	31.4	26.99
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	28.77	25.4
GSMUA_Achr8P22610_001	Banana	plasma membrane	25.59	24.41
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	28.22	24.31
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	13.28	19.75
GSMUA_Achr1P25960_001	Banana	mitochondrion	5.12	17.62
GSMUA_Achr5P13600_001	Banana	extracellular	7.19	17.51
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	12.72	13.45
Zm00001d035757_P003	Maize	plasma membrane	29.05	12.48
GSMUA_Achr3P04690_001	Banana	cytosol	18.12	11.5
GSMUA_Achr6P16780_001	Banana	cytosol	17.7	10.91
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	15.77	10.54
GSMUA_Achr1P25970_001	Banana	cytosol	10.65	10.32
GSMUA_Achr5P13590_001	Banana	cytosol	11.89	9.35
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	9.68	7.52
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	17.43	7.22
GSMUA_Achr3P13420_001	Banana	cytosol	5.95	6.94
GSMUA_Achr1P25980_001	Banana	plasma membrane	2.63	6.71

Protein Annotations

EnsemblPlants:GSMUA_Achr2P11400_001	EnsemblPlants:GSMUA_Achr2T11400_001	EnsemblPlantsGene:GSMUA_Achr2G11400_001	Gene3D:1.20.58.2220	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	PFAM:PF02181
PFscan:PS51444	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix
UniParc:UPI000296EED5	UniProt:M0S731	MapMan:20.2.2.6.1	:	:	:

Description

Putative FH protein NFH1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G11400_001]

Coordinates

chr2:+:14287118..14291173

Molecular Weight (calculated)

79112.1 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.398

Length

723 amino acids

Sequence
(BLAST)

001: MSMFAFFLLL SDASLHFLYY MTTITTTTST ATTTSIAIHN RRTLHQPFFP LTSSSLPPAQ PPSPSLPKYP SSSATSHSFR PFFPLYPSPP PPPPPSPVAT
101: LPTFPANISS LVSSPSRHSP PRLVPAVVSP LLALALLALS LALFVHIRRR RRRGGADKDA RSDSLRFFPP DTTASDGRKL SATSSAAPAP AGTAGSEFLY
201: LGTLVNSRGR ANESSAAQPA AGGGSPYRKL GSPELRPLPP LPRQFQTTEG GRSSSEEFYS PKNSPGGKGS SAAGPASSSK KPALGSKMER CGSRSSTLST
301: PSCISSNSAT LQYSGQNLQS PRKIGDFARN SVAVGHNPVP PPPPLPPPAP DERREGQNHE ENPRPKLKPL HWDKVRASSD QAMVWDQLKS GSFQLNEEMI
401: ETLFLSNTGM TTKEMSGGQI NPPMNQESRI LEPKKSQNIA ILLKALNVNK EDVCEALLEG IPSTHFDIFM VYVCHKGKVD SLGNEILEAL TKMVPSREEE
501: LKLKEYKNDS PFKLGPAESF LKAVLDIPFA FKRVDAMLYI ANFYPEVNHL RNLFRTLEIA CEELRSSRMF SKLLEAVLKT GNRMNVGTNR GEAHAFKLDA
601: LLKLVDVKGT DGKTTLLHFA EDEILDIQAR ESSTLSMVKE ITEYFQGDST KEESHPFRVF MVIRDFLATL DQVCREVEKI NEHNITIMER HFPVTANQTS
701: EPVFPSFQAS RSGSSDDDSS LSS

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.