Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 6
- vacuole 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g014430.2.1 | Tomato | nucleus | 92.32 | 92.07 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 31.79 | 55.81 |
| PGSC0003DMT400056393 | Potato | cytosol | 34.04 | 53.54 |
| PGSC0003DMT400083315 | Potato | cytosol | 12.98 | 52.69 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 37.35 | 50.09 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 28.87 | 49.66 |
| PGSC0003DMT400013717 | Potato | plastid | 56.16 | 49.25 |
| Os01t0897700-01 | Rice | cytosol | 15.1 | 46.72 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 54.3 | 44.09 |
| KRH71295 | Soybean | vacuole | 50.07 | 42.95 |
| KRH50174 | Soybean | vacuole | 49.93 | 42.08 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 35.89 | 40.39 |
| PGSC0003DMT400039073 | Potato | cytosol | 14.44 | 40.37 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 44.77 | 40.09 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 41.46 | 39.42 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 37.62 | 39.28 |
| GSMUA_Achr10P... | Banana | plastid | 41.72 | 39.23 |
| CDY44259 | Canola | plasma membrane, vacuole | 43.44 | 38.91 |
| Bra004786.1-P | Field mustard | mitochondrion, plasma membrane, plastid | 43.84 | 38.62 |
| CDY17909 | Canola | golgi, vacuole | 43.31 | 38.56 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 39.74 | 38.17 |
| PGSC0003DMT400067386 | Potato | cytosol | 17.48 | 38.04 |
| Bra000328.1-P | Field mustard | golgi, plasma membrane, vacuole | 45.03 | 37.99 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 39.47 | 37.82 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 39.34 | 37.74 |
| TraesCS5A01G304700.1 | Wheat | golgi | 39.34 | 37.74 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 44.5 | 37.58 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 41.72 | 37.54 |
| Zm00001d021173_P001 | Maize | plasma membrane | 37.75 | 37.4 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 46.09 | 36.86 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 45.43 | 36.49 |
| PGSC0003DMT400055250 | Potato | vacuole | 42.52 | 36.23 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 45.17 | 35.93 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 45.03 | 35.75 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 45.03 | 35.64 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 44.5 | 35.33 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 44.5 | 35.15 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 44.24 | 35.08 |
| PGSC0003DMT400036575 | Potato | mitochondrion | 13.24 | 34.97 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 40.4 | 34.62 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 38.94 | 34.59 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 37.88 | 33.97 |
| PGSC0003DMT400031544 | Potato | cytosol | 19.74 | 32.82 |
| TraesCS1B01G059400.1 | Wheat | plastid | 24.11 | 32.33 |
| TraesCS1D01G010200.1 | Wheat | plastid | 24.11 | 32.04 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 22.52 | 31.89 |
| HORVU1Hr1G002300.8 | Barley | plastid | 27.95 | 29.14 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 30.46 | 27.71 |
| PGSC0003DMT400063542 | Potato | extracellular, golgi, plasma membrane | 32.58 | 27.33 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 42.25 | 26.61 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 31.92 | 26.11 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 28.61 | 25.74 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 27.15 | 25.03 |
| PGSC0003DMT400049488 | Potato | golgi, plasma membrane, vacuole | 28.74 | 24.91 |
| PGSC0003DMT400063186 | Potato | plastid | 24.9 | 24.9 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 25.43 | 24.0 |
| PGSC0003DMT400063143 | Potato | cytosol | 9.8 | 23.57 |
| PGSC0003DMT400029052 | Potato | cytosol | 8.48 | 23.19 |
| PGSC0003DMT400079306 | Potato | cytosol | 11.26 | 21.09 |
| PGSC0003DMT400020452 | Potato | cytosol | 4.11 | 18.79 |
| PGSC0003DMT400083163 | Potato | cytosol, mitochondrion, nucleus | 2.12 | 13.01 |
| Zm00001d035757_P003 | Maize | plasma membrane | 26.89 | 12.06 |
| PGSC0003DMT400079305 | Potato | cytosol, mitochondrion, plastid | 5.3 | 5.12 |
Protein Annotations
| Gene3D:1.20.58.2220 | EntrezGene:102595554 | MapMan:20.2.2.6.1 | InterPro:FH2_Formin | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR015425 | UniProt:M1CD33 | PFAM:PF02181 | EnsemblPlantsGene:PGSC0003DMG400025208 | PGSC:PGSC0003DMG400025208 |
| EnsemblPlants:PGSC0003DMT400064911 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | SMART:SM00498 | SUPFAM:SSF101447 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002960CFD | RefSeq:XP_006351093.1 | SEG:seg | : |
Description
Formin 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400025208]
Coordinates
chr8:+:7746500..7751941
Molecular Weight (calculated)
84669.1 Da
IEP (calculated)
6.667
GRAVY (calculated)
-0.296
Length
755 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSPLFSLCL IFTFFLLSSA THRRLLHQPL PPTSTPSINK AKPPYPHFHP FFVFFLPPPP PPSNDFATFP ANISSLILPR SLHSSNNSIT NKFIAILVSA
101: SILSATFVTV LVLFFFLYHR HPHREDESCD DDHERNDTLR LVSSNTTPSH IEIEKETSST LVSCREEIAQ SSTASNDYVT LNYQRIGSPE LHPLPPLPRH
201: QYFKQHLNIG SFEDEDDGFF SPRGSSGGRG SPDFIQRSFR YQYLNYNSSN DSLSNSPSGG LSLVKFPARP RFILQPVEHR PMSSSSISSG STHNSPASQI
301: PSSSLQNPVS TMSKFGYPER YVSRRLPPPP PLPPPRVVIE NDGPSMPVSF HSADGENIKP KLKPLHWDKV RANSDRAMVW DQLKSNSFQL NEEMIETLFT
401: INSSNLNSKD GVRLPIIPVM NQEKQLLDLK KSQNIAILLR ALQITSDEVC EALLEGSADT LGMELLESLM KMAPTKEEER KLRNIKDESP FKLGPAERFL
501: KAVVDIPFAF KRVDAMLYIA CFDSEVEYLK GSFQTLEIAC EELRNSRTFL RLLEAVLRTG NRMNMGTDRG DARAFKLDTL LKLVDIKGAD GKTTLLHFVL
601: HETIRAEGSH LSDADLTSRD EAEFRNGVHV ISALSHELAN VKKAAVMDSD ILSNEVAKLA AGVAKITDVI KLNQGLVLDE SSRKFSESMN GFLKKAEGEI
701: MNIQAQEEFA LSMVKELTEY FYGDLAKEEA RRIRIFMVVK DFLSIIDQVC TDLGK
101: SILSATFVTV LVLFFFLYHR HPHREDESCD DDHERNDTLR LVSSNTTPSH IEIEKETSST LVSCREEIAQ SSTASNDYVT LNYQRIGSPE LHPLPPLPRH
201: QYFKQHLNIG SFEDEDDGFF SPRGSSGGRG SPDFIQRSFR YQYLNYNSSN DSLSNSPSGG LSLVKFPARP RFILQPVEHR PMSSSSISSG STHNSPASQI
301: PSSSLQNPVS TMSKFGYPER YVSRRLPPPP PLPPPRVVIE NDGPSMPVSF HSADGENIKP KLKPLHWDKV RANSDRAMVW DQLKSNSFQL NEEMIETLFT
401: INSSNLNSKD GVRLPIIPVM NQEKQLLDLK KSQNIAILLR ALQITSDEVC EALLEGSADT LGMELLESLM KMAPTKEEER KLRNIKDESP FKLGPAERFL
501: KAVVDIPFAF KRVDAMLYIA CFDSEVEYLK GSFQTLEIAC EELRNSRTFL RLLEAVLRTG NRMNMGTDRG DARAFKLDTL LKLVDIKGAD GKTTLLHFVL
601: HETIRAEGSH LSDADLTSRD EAEFRNGVHV ISALSHELAN VKKAAVMDSD ILSNEVAKLA AGVAKITDVI KLNQGLVLDE SSRKFSESMN GFLKKAEGEI
701: MNIQAQEEFA LSMVKELTEY FYGDLAKEEA RRIRIFMVVK DFLSIIDQVC TDLGK
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.