Factsheet for PGSC0003DMT400067386

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083315	Potato	cytosol	38.9	72.58
PGSC0003DMT400036575	Potato	mitochondrion	48.41	58.74
CDX94358	Canola	mitochondrion, plastid	22.77	50.64
PGSC0003DMT400039073	Potato	cytosol	38.04	48.89
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	53.31	37.22
PGSC0003DMT400031544	Potato	cytosol	48.13	36.78
Solyc07g052730.2.1	Tomato	golgi	96.83	35.18
PGSC0003DMT400056393	Potato	cytosol	42.65	30.83
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	57.35	30.66
PGSC0003DMT400036332	Potato	plasma membrane	76.37	28.71
VIT_12s0059g02680.t01	Wine grape	golgi	65.42	28.34
KRH56076	Soybean	endoplasmic reticulum	63.11	26.01
KRH25436	Soybean	endoplasmic reticulum, golgi, vacuole	61.96	25.9
CDY22934	Canola	nucleus, plastid	53.31	25.38
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	58.21	24.75
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	60.81	24.23
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	55.33	24.09
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	54.47	23.65
Bra039561.1-P	Field mustard	golgi	56.2	23.3
PGSC0003DMT400029052	Potato	cytosol	17.87	22.46
Os04t0100300-00	Rice	plasma membrane	53.03	22.36
CDY53556	Canola	nucleus	53.31	21.89
TraesCS6B01G163200.1	Wheat	plasma membrane	52.74	21.68
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	53.03	21.65
Os02t0161100-01	Rice	golgi	54.76	21.57
HORVU0Hr1G015390.6	Barley	cytosol, plasma membrane, plastid	51.87	21.53
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	52.45	21.41
Os07t0545500-01	Rice	plasma membrane	57.06	21.31
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	55.33	21.17
EES04559	Sorghum	plasma membrane	51.87	21.08
PGSC0003DMT400063143	Potato	cytosol	19.02	21.02
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	55.33	20.82
TraesCS2B01G239500.1	Wheat	plasma membrane	56.2	20.72
PGSC0003DMT400020452	Potato	cytosol	9.8	20.61
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.91	20.51
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	55.33	20.3
TraesCS2D01G220300.1	Wheat	plasma membrane	55.62	20.17
EES10325	Sorghum	golgi	55.04	19.81
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	57.64	19.49
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	57.64	19.27
Zm00001d024947_P005	Maize	plasma membrane	55.62	19.24
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	57.93	19.18
HORVU2Hr1G043830.5	Barley	cytosol, nucleus, plastid	56.2	18.97
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	6.63	18.7
PGSC0003DMT400013717	Potato	plastid	44.67	18.0
Zm00001d015326_P003	Maize	mitochondrion, plastid	51.59	17.69
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	38.04	17.48
GSMUA_Achr2P14090_001	Banana	mitochondrion	33.43	17.44
PGSC0003DMT400038519	Potato	endoplasmic reticulum	43.52	17.14
PGSC0003DMT400055250	Potato	vacuole	43.23	16.93
PGSC0003DMT400079306	Potato	cytosol	19.6	16.87
PGSC0003DMT400058304	Potato	plasma membrane	38.04	16.5
PGSC0003DMT400063542	Potato	extracellular, golgi, plasma membrane	40.92	15.78
PGSC0003DMT400063186	Potato	plastid	34.01	15.63
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	41.79	15.36
HORVU2Hr1G006690.1	Barley	peroxisome	10.09	4.01
AT4G15200.2	Thale cress	extracellular, golgi, plasma membrane	4.03	3.0
PGSC0003DMT400079305	Potato	cytosol, mitochondrion, plastid	2.59	1.15

Protein Annotations

EnsemblPlants:PGSC0003DMT400067386	EnsemblPlantsGene:PGSC0003DMG402026197	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213
PANTHER:PTHR23213:SF195	PFAM:PF02181	PFscan:PS51444	PGSC:PGSC0003DMG402026197	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	UniParc:UPI0002952EE3	UniProt:M1CH63	MapMan:20.2.2.6.1	:	:

Description

Actin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG402026197]

Coordinates

chr7:+:47452646..47454657

Molecular Weight (calculated)

38790.4 Da

IEP (calculated)

5.368

GRAVY (calculated)

-0.385

Length

347 amino acids

Sequence
(BLAST)

001: MDEELKLRLF AGDISQLGPA ERFLKSMVAI PFAFKRMEAL LLMCSLQEEV SSIKESFATL EVASKELRNS RLFLKLLEAV LKTGNRMNDG TFRGGAQAFK
101: LDTLLKLSDV KGADGKTTLL NFVVQEIIRS EGLRAARKLR ENQSTTSVQT EDLVEDPAQE SADYHRNLGL QMVSGLSNEL ENVRKASLID GENLSAAVMK
201: LSHSLVKTKE FLDTDMRSLE DESKFRDTLT NFIQHAEQEM TCILEEEKKI MSLVKSTGDY FHGNSGKDEG LRLFSVVSDF LIMLDKACTV VRNSTKLPVK
301: TPKKGTLTSA SQESCPESLP DIRKQQFPAI QERQMHYSSS DDESSSP

Best Arabidopsis Sequence Match ( AT5G54650.1 )
(BLAST)

001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD

Arabidopsis Description

FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]
SUBAcon: [mitochondrion,plasma membrane,extracellular,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.