Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G163200.1 | Wheat | plasma membrane | 94.59 | 95.26 |
| TraesCS6A01G135200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 95.06 | 95.06 |
| HORVU0Hr1G015390.6 | Barley | cytosol, plasma membrane, plastid | 84.24 | 85.65 |
| Os02t0161100-01 | Rice | golgi | 74.12 | 71.51 |
| EES04559 | Sorghum | plasma membrane | 69.41 | 69.09 |
| PGSC0003DMT400083315 | Potato | cytosol | 14.24 | 65.05 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 68.24 | 57.31 |
| PGSC0003DMT400036575 | Potato | mitochondrion | 18.12 | 53.85 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 31.41 | 53.51 |
| PGSC0003DMT400067386 | Potato | cytosol | 21.41 | 52.45 |
| GSMUA_Achr8P07370_001 | Banana | endoplasmic reticulum, golgi | 29.53 | 50.5 |
| CDX94358 | Canola | mitochondrion, plastid | 8.94 | 48.72 |
| PGSC0003DMT400039073 | Potato | cytosol | 15.29 | 48.15 |
| GSMUA_Achr3P23040_001 | Banana | cytosol, mitochondrion, plastid | 33.76 | 44.22 |
| PGSC0003DMT400031544 | Potato | cytosol | 22.59 | 42.29 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 35.88 | 38.08 |
| Bra029012.1-P | Field mustard | plasma membrane | 37.29 | 36.9 |
| CDY43811 | Canola | golgi | 36.94 | 36.81 |
| CDY22934 | Canola | nucleus, plastid | 31.41 | 36.63 |
| CDY43029 | Canola | plasma membrane | 37.18 | 36.62 |
| CDY42470 | Canola | plasma membrane | 36.47 | 36.09 |
| Bra037087.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 34.59 | 36.03 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 33.29 | 35.51 |
| Bra002969.1-P | Field mustard | plasma membrane | 36.59 | 35.46 |
| CDY18346 | Canola | plasma membrane | 36.35 | 35.44 |
| Bra039561.1-P | Field mustard | golgi | 34.82 | 35.36 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 37.41 | 35.33 |
| Solyc10g006540.2.1 | Tomato | extracellular | 38.47 | 35.05 |
| KRH25436 | Soybean | endoplasmic reticulum, golgi, vacuole | 34.0 | 34.82 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 32.59 | 34.67 |
| KRH56076 | Soybean | endoplasmic reticulum | 34.12 | 34.44 |
| PGSC0003DMT400049488 | Potato | golgi, plasma membrane, vacuole | 34.94 | 34.1 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 36.47 | 33.77 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 36.59 | 33.69 |
| CDY53556 | Canola | nucleus | 33.41 | 33.61 |
| Solyc07g064010.2.1 | Tomato | golgi | 34.47 | 32.96 |
| KRH27118 | Soybean | plasma membrane | 34.94 | 32.89 |
| KRH22219 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 34.94 | 32.75 |
| Solyc07g052730.2.1 | Tomato | golgi | 35.76 | 31.83 |
| KRH25896 | Soybean | plasma membrane | 35.88 | 31.35 |
| KRH55607 | Soybean | plasma membrane | 35.88 | 31.19 |
| TraesCS2D01G220300.1 | Wheat | plasma membrane | 33.29 | 29.57 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 15.41 | 28.11 |
| TraesCS2D01G043300.1 | Wheat | extracellular, plasma membrane | 33.29 | 27.58 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 24.94 | 26.97 |
| TraesCS1D01G010200.1 | Wheat | plastid | 17.65 | 26.41 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 26.82 | 25.73 |
| TraesCS2D01G325200.1 | Wheat | golgi, mitochondrion | 24.47 | 24.7 |
| TraesCS2D01G386600.1 | Wheat | cytosol | 10.47 | 23.18 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 25.65 | 22.9 |
| TraesCS5D01G089100.1 | Wheat | cytosol | 8.12 | 22.55 |
| TraesCS1D01G329400.1 | Wheat | plastid | 22.12 | 22.54 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 23.18 | 21.86 |
| TraesCS2D01G190800.1 | Wheat | cytosol | 9.65 | 20.1 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 18.12 | 10.99 |
| TraesCS6D01G339300.1 | Wheat | cytosol | 15.18 | 9.66 |
| TraesCS4D01G237900.1 | Wheat | plastid | 9.06 | 8.5 |
| TraesCS2D01G190700.1 | Wheat | cytosol | 3.06 | 7.32 |
| TraesCS2D01G386500.1 | Wheat | cytosol | 3.65 | 6.39 |
| TraesCS7D01G150000.1 | Wheat | mitochondrion | 3.41 | 4.96 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G124300.1 | EnsemblPlantsGene:TraesCS6D01G124300 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF235 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 |
| SUPFAM:SSF101447 | TMHMM:TMhelix | MapMan:20.2.2.6.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:+:89006377..89009680
Molecular Weight (calculated)
92973.5 Da
IEP (calculated)
6.289
GRAVY (calculated)
-0.370
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRRMGLLVL FVAAVLVGPS RGGGEVDGVH VLSGWTQPPS SSSSVPPFSL VLDGDLVDKI RSICLQDIVG AEEILGTGQT FAYDELPSRS SKSELKTMLL
101: MELLALLPPD KSSVTHDCIR ANYFSLGMSQ EFINYLEDQL FLFGSDFYPR RRHLADQMVE DGPSSGGEAK FPLSLMEQPF TPPNFPNTEP RSRRLEDKPA
201: KKRWGVPPPV SPSDKQHNYI KLVLTVVLPT AAFSFIAAFL IFYCCGCNKS KVSVGEPRDD HPLLHMQSAN TPGSSPVIRA SSSQLHKDDQ GVRASKAGGS
301: MSRCFPCCFK TSSDVSTPAQ ATGGTQNNTS DAPKPVPPPP PPPPPPPPPP PPIRKAGPPP PAPPKGSLAR FPQLSPVESS HSEGSSASEQ ASESSEAEVG
401: APRPKLRPFY WNKVLANPNQ SMAWHDIKFG SFHVNEDMIE ALFGYGAGNR NNTKDKELAM ADPSPQHVSL LDFKKSCNLA VVFKAMNVRV EDIQDALTEG
501: NELPRLLLET ILRMKPNDEE ELKLRLYDGD YSQLGLAEQV MKALTDIPFA YKRISALLFM SSLQEDASSL RDSFLQLEAA CGELKHRLFL KLLEAVLKTG
601: NRLNDGTFRG GANAFKLDTL LKLSDVKGAD GKTTLLHFVV QEIIRSEGVR EARLAMESGR TQPSGDDSNG SVQEDGEYYS KLGLKIVSGL SSELVNAKNI
701: AALDADALSA SVLQLRRELL NAKEFLNSDM ATIDENSGFH RSLARFVEHA ENETNFLLKE EKRLRSLVKK TIRYFHGNDV KDDGFSLFVI VRDFLVMLDK
801: ACKEVGASQK KAASQSRSSG SCNPASQLNP QEKQFPAVLD DHLDSSDSND
101: MELLALLPPD KSSVTHDCIR ANYFSLGMSQ EFINYLEDQL FLFGSDFYPR RRHLADQMVE DGPSSGGEAK FPLSLMEQPF TPPNFPNTEP RSRRLEDKPA
201: KKRWGVPPPV SPSDKQHNYI KLVLTVVLPT AAFSFIAAFL IFYCCGCNKS KVSVGEPRDD HPLLHMQSAN TPGSSPVIRA SSSQLHKDDQ GVRASKAGGS
301: MSRCFPCCFK TSSDVSTPAQ ATGGTQNNTS DAPKPVPPPP PPPPPPPPPP PPIRKAGPPP PAPPKGSLAR FPQLSPVESS HSEGSSASEQ ASESSEAEVG
401: APRPKLRPFY WNKVLANPNQ SMAWHDIKFG SFHVNEDMIE ALFGYGAGNR NNTKDKELAM ADPSPQHVSL LDFKKSCNLA VVFKAMNVRV EDIQDALTEG
501: NELPRLLLET ILRMKPNDEE ELKLRLYDGD YSQLGLAEQV MKALTDIPFA YKRISALLFM SSLQEDASSL RDSFLQLEAA CGELKHRLFL KLLEAVLKTG
601: NRLNDGTFRG GANAFKLDTL LKLSDVKGAD GKTTLLHFVV QEIIRSEGVR EARLAMESGR TQPSGDDSNG SVQEDGEYYS KLGLKIVSGL SSELVNAKNI
701: AALDADALSA SVLQLRRELL NAKEFLNSDM ATIDENSGFH RSLARFVEHA ENETNFLLKE EKRLRSLVKK TIRYFHGNDV KDDGFSLFVI VRDFLVMLDK
801: ACKEVGASQK KAASQSRSSG SCNPASQLNP QEKQFPAVLD DHLDSSDSND
001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
Arabidopsis Description
FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.