Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G389300.1 | Wheat | cytosol | 97.9 | 97.83 |
| HORVU6Hr1G085030.6 | Barley | plasma membrane | 91.69 | 86.26 |
| Os02t0794900-00 | Rice | cytosol | 72.88 | 70.56 |
| PGSC0003DMT400029052 | Potato | cytosol | 13.63 | 65.94 |
| Zm00001d018371_P001 | Maize | cytosol | 66.59 | 62.87 |
| TraesCS2D01G386600.1 | Wheat | cytosol | 18.05 | 62.76 |
| PGSC0003DMT400020452 | Potato | cytosol | 7.64 | 61.82 |
| KXG31267 | Sorghum | cytosol | 68.39 | 61.23 |
| TraesCS2D01G190800.1 | Wheat | cytosol | 17.9 | 58.58 |
| TraesCS5D01G089100.1 | Wheat | cytosol | 13.41 | 58.5 |
| GSMUA_Achr1P25980_001 | Banana | plasma membrane | 10.86 | 51.24 |
| VIT_11s0016g00160.t01 | Wine grape | cytosol | 38.88 | 44.97 |
| TraesCS2D01G190700.1 | Wheat | cytosol | 11.69 | 43.94 |
| KRH72294 | Soybean | cytosol | 38.2 | 42.18 |
| CDY32721 | Canola | cytosol | 39.18 | 42.04 |
| AT5G58160.1 | Thale cress | cytosol | 39.85 | 42.02 |
| CDY02799 | Canola | cytosol | 39.1 | 41.73 |
| Bra002668.1-P | Field mustard | cytosol | 40.37 | 41.72 |
| CDY62689 | Canola | cytosol | 40.37 | 41.72 |
| KRH03063 | Soybean | cytosol | 37.23 | 41.14 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 42.55 | 40.54 |
| KRH15654 | Soybean | cytosol, peroxisome | 17.75 | 39.04 |
| CDY43877 | Canola | cytosol | 38.43 | 38.92 |
| Solyc07g005480.2.1 | Tomato | vacuole | 25.09 | 37.9 |
| Bra020385.1-P | Field mustard | cytosol | 39.63 | 37.89 |
| Solyc12g010110.1.1 | Tomato | cytosol | 36.03 | 37.03 |
| TraesCS2D01G386500.1 | Wheat | cytosol | 11.01 | 30.31 |
| TraesCS7D01G150000.1 | Wheat | mitochondrion | 12.43 | 28.38 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 10.71 | 18.19 |
| TraesCS4D01G237900.1 | Wheat | plastid | 11.98 | 17.66 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 11.01 | 16.59 |
| TraesCS2D01G325200.1 | Wheat | golgi, mitochondrion | 9.66 | 15.32 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 10.34 | 15.32 |
| TraesCS6D01G124300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 9.66 | 15.18 |
| TraesCS1D01G010200.1 | Wheat | plastid | 6.37 | 14.96 |
| TraesCS2D01G043300.1 | Wheat | extracellular, plasma membrane | 11.39 | 14.81 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 10.49 | 14.71 |
| TraesCS2D01G220300.1 | Wheat | plasma membrane | 10.41 | 14.52 |
| TraesCS1D01G329400.1 | Wheat | plastid | 8.69 | 13.91 |
Protein Annotations
| Gene3D:1.20.58.2220 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | ncoils:Coil | InterPro:FH2_Formin |
| InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 | InterPro:IPR029023 | PFAM:PF02181 | PFAM:PF10409 |
| PFscan:PS51181 | PFscan:PS51182 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF271 | InterPro:Prot-tyrosine_phosphatase-like |
| SMART:SM00498 | SMART:SM01326 | SUPFAM:SSF101447 | SUPFAM:SSF52799 | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase |
| EnsemblPlantsGene:TraesCS6D01G339300 | EnsemblPlants:TraesCS6D01G339300.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:-:438896456..438908215
Molecular Weight (calculated)
145469.0 Da
IEP (calculated)
6.952
GRAVY (calculated)
-0.410
Length
1335 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALFRKFFFK KPPDGVLLIT DNIYVFDHCF SLNAPEEDQF EAHTRGIAAH LLEDFHDHSF MVANFGTRAE ESRLYHILSE YGMTVLDYPG HYEGCPLLTI
0101: EMVHCILKSS ESWLSLGQHN LLIMHCEQGC WPILAFMLAA LLLYLGQYSD EQKTLDMLYK QSSSEFLEMF SPLNPMPSQI RYLRYISMRN VMPEWPPADR
0201: ALTLDCLTLR MLPDFQSQGG FCPIFRIYGP DPLMPHDQTP KVLFSTPKTS NLVRFNSQAD ERVNINLQCH VQGDVVIECS NLYDDLDREE MVIFSDMDAT
0301: TSLVTTEPLS HQDKQGLGVE EFAKVLDIFN HLDWLDGDTD TALDRPQKRF QVTSQGNINA SPPDEPETFF DTQEELGFDN FSGEINSSAH VLKLQNHFGM
0401: LGSTELKQGP PHSSPTEVPS KPHRIDLDPS RTEPPSVLFS PSEVTKPKAS ASSVAPSSVT VTPQPVFSPV QPQPLPSDSA VQISSEASAT KSAGKPGSQT
0501: PIQHEPSPLM VTKSGSSTSW IPSCAPPPLP PRPATVSLAP VSPTLPINTS TSLISVSLKS TMPSPSPPPE PSAFAQAFAT EQLVKSQESS YEILKSLSDS
0601: STASASSVCI VKESSTPKAS SPVTLPAIPL TSDSGPLVTP VTRSDPNPAS PLPPPPPPPP PIKAATVYEQ ETSRKEKVAP PQPPPPPPPP ALPRAPFENA
0701: TQSFTTYEIS SPPVRSSPPP PPPPPPPSVF ADKKVSSASK YAVPSPLSPN FSQTVPRLQA PTIPPPPPPP PRSSSLVCSS PSTSGRHFMA APHPPPPPPR
0801: LHTMASHVSA PPAPPLLVAA PHPPPPPPPL HTMSSRGSAP PVPPLPPPKL AGASNASQKP SVTRPPPPPP GPPPKNSSNS LPSKGTVASA APPPPPTLSF
0901: GAKGRSAVRS KSPRGLRANQ PSKRTPLKPL HWVKVSRATQ GSLWADTQKS DEASRTPEID LSELESLFSV SMPSTDAKRT RQRPPVASKQ EKVHLIDLQR
1001: SKNCEIMLRN IKMPLPDLMA SVLTLDDSIV DGDQVDYLIK FCPTKEEMEL LKSYTGSKEN LGKCEQFFLE MMKVPRVESK LRILSFKIKF LTQVADVKNN
1101: LNTINDVAEE VRNSDKLKRV MQTILSLGNA LNQGTARGSA VGFRLDSLLK LIDIRARNNK MTLMHYLCKV LAGKLPEVLD FVKDLAHLEP ATKIQLKDLA
1201: EEMQAITKGL EKVEQELATS EKDGPVSETF YKKLKEFLAD AQAEGRSLAS LYSTAGKSAD SLAHYFGEDP VRCPFEQVVS TLLSFVKTFE RAHAENLRQA
1301: EAEKKKAQME AEREKAKAAA AHKKAGSPEP GVSDR
0101: EMVHCILKSS ESWLSLGQHN LLIMHCEQGC WPILAFMLAA LLLYLGQYSD EQKTLDMLYK QSSSEFLEMF SPLNPMPSQI RYLRYISMRN VMPEWPPADR
0201: ALTLDCLTLR MLPDFQSQGG FCPIFRIYGP DPLMPHDQTP KVLFSTPKTS NLVRFNSQAD ERVNINLQCH VQGDVVIECS NLYDDLDREE MVIFSDMDAT
0301: TSLVTTEPLS HQDKQGLGVE EFAKVLDIFN HLDWLDGDTD TALDRPQKRF QVTSQGNINA SPPDEPETFF DTQEELGFDN FSGEINSSAH VLKLQNHFGM
0401: LGSTELKQGP PHSSPTEVPS KPHRIDLDPS RTEPPSVLFS PSEVTKPKAS ASSVAPSSVT VTPQPVFSPV QPQPLPSDSA VQISSEASAT KSAGKPGSQT
0501: PIQHEPSPLM VTKSGSSTSW IPSCAPPPLP PRPATVSLAP VSPTLPINTS TSLISVSLKS TMPSPSPPPE PSAFAQAFAT EQLVKSQESS YEILKSLSDS
0601: STASASSVCI VKESSTPKAS SPVTLPAIPL TSDSGPLVTP VTRSDPNPAS PLPPPPPPPP PIKAATVYEQ ETSRKEKVAP PQPPPPPPPP ALPRAPFENA
0701: TQSFTTYEIS SPPVRSSPPP PPPPPPPSVF ADKKVSSASK YAVPSPLSPN FSQTVPRLQA PTIPPPPPPP PRSSSLVCSS PSTSGRHFMA APHPPPPPPR
0801: LHTMASHVSA PPAPPLLVAA PHPPPPPPPL HTMSSRGSAP PVPPLPPPKL AGASNASQKP SVTRPPPPPP GPPPKNSSNS LPSKGTVASA APPPPPTLSF
0901: GAKGRSAVRS KSPRGLRANQ PSKRTPLKPL HWVKVSRATQ GSLWADTQKS DEASRTPEID LSELESLFSV SMPSTDAKRT RQRPPVASKQ EKVHLIDLQR
1001: SKNCEIMLRN IKMPLPDLMA SVLTLDDSIV DGDQVDYLIK FCPTKEEMEL LKSYTGSKEN LGKCEQFFLE MMKVPRVESK LRILSFKIKF LTQVADVKNN
1101: LNTINDVAEE VRNSDKLKRV MQTILSLGNA LNQGTARGSA VGFRLDSLLK LIDIRARNNK MTLMHYLCKV LAGKLPEVLD FVKDLAHLEP ATKIQLKDLA
1201: EEMQAITKGL EKVEQELATS EKDGPVSETF YKKLKEFLAD AQAEGRSLAS LYSTAGKSAD SLAHYFGEDP VRCPFEQVVS TLLSFVKTFE RAHAENLRQA
1301: EAEKKKAQME AEREKAKAAA AHKKAGSPEP GVSDR
0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
Arabidopsis Description
FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.