Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G209600.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS2A01G183000.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS5D01G089100.1 | Wheat | cytosol | 48.77 | 65.03 |
| TraesCS2D01G386600.1 | Wheat | cytosol | 56.62 | 60.16 |
| Solyc06g069670.2.1 | Tomato | nucleus | 63.48 | 28.03 |
| TraesCS6D01G339300.1 | Wheat | cytosol | 58.58 | 17.9 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 59.31 | 17.27 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 21.81 | 11.32 |
| TraesCS1D01G010200.1 | Wheat | plastid | 15.44 | 11.09 |
| TraesCS2D01G325200.1 | Wheat | golgi, mitochondrion | 20.59 | 9.98 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 21.32 | 9.66 |
| TraesCS6D01G124300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 20.1 | 9.65 |
| TraesCS2D01G220300.1 | Wheat | plasma membrane | 21.32 | 9.09 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 21.08 | 9.03 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 19.61 | 9.03 |
| TraesCS2D01G043300.1 | Wheat | extracellular, plasma membrane | 22.3 | 8.87 |
| GSMUA_Achr7P26420_001 | Banana | cytosol, mitochondrion | 19.36 | 8.49 |
| TraesCS1D01G329400.1 | Wheat | plastid | 16.91 | 8.27 |
| Bra009307.1-P | Field mustard | cytosol | 11.52 | 5.82 |
| TraesCS4D01G237900.1 | Wheat | plastid | 11.03 | 4.97 |
| CDX69992 | Canola | cytosol | 8.09 | 4.36 |
| Zm00001d017027_P001 | Maize | cytosol | 2.45 | 4.18 |
| AT3G32420.1 | Thale cress | cytosol | 0.74 | 2.8 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 0.98 | 1.18 |
| HORVU2Hr1G034470.10 | Barley | cytosol | 2.94 | 1.03 |
| TraesCS2D01G386500.1 | Wheat | cytosol | 0.74 | 0.62 |
| TraesCS2D01G190700.1 | Wheat | cytosol | 0.49 | 0.56 |
| TraesCS2B01G209500.1 | Wheat | cytosol | 0.49 | 0.56 |
| TraesCS2A01G182900.1 | Wheat | cytosol, golgi, nucleus | 0.49 | 0.56 |
| CDX99027 | Canola | nucleus | 0.74 | 0.35 |
| TraesCS7D01G150000.1 | Wheat | mitochondrion | 0.25 | 0.17 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G190800.1 | EnsemblPlantsGene:TraesCS2D01G190800 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF218 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SMART:SM00498 |
| SUPFAM:SSF101447 | MapMan:20.2.2.6.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:134795881..134800679
Molecular Weight (calculated)
45751.4 Da
IEP (calculated)
9.317
GRAVY (calculated)
-0.438
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MWETVFCSVS EFDLSELESL FPAAVPKTDN TSKTDRRKSL GSKPEKVQLI ELRRANNTEI MLTKVKMPLP DLVSAALALD QSTLDVDQVE NLIKFCPTKE
101: EMELLKNYTG DKQLLGKCEL FFLELMKVPR MESKLRVFSF KIQFGSQVAD LGKSLKTIDS SCNEIRSSLK LKEIMKKILL LGNTLNQGTA RGAAVGFRLD
201: SLLKLTDTRA TNNKMTLMHY LCKVLAAKSP QLLNFHVDLV SLEATSKIQL KMLAEEMQAV SKGLEKVEHE FKASESDGPV SEIFREKLKE FTDNAGADVQ
301: SLSSLFSEVG KKADQLIKYF GEDPVRCPFE QVMSTLLTFV TMFRKAHEEN IKQAELEKKK AQKEAEAEKS KNAQLASKND SKASNPSRQA KQTLEKTRST
401: SRRGKDGG
101: EMELLKNYTG DKQLLGKCEL FFLELMKVPR MESKLRVFSF KIQFGSQVAD LGKSLKTIDS SCNEIRSSLK LKEIMKKILL LGNTLNQGTA RGAAVGFRLD
201: SLLKLTDTRA TNNKMTLMHY LCKVLAAKSP QLLNFHVDLV SLEATSKIQL KMLAEEMQAV SKGLEKVEHE FKASESDGPV SEIFREKLKE FTDNAGADVQ
301: SLSSLFSEVG KKADQLIKYF GEDPVRCPFE QVMSTLLTFV TMFRKAHEEN IKQAELEKKK AQKEAEAEKS KNAQLASKND SKASNPSRQA KQTLEKTRST
401: SRRGKDGG
0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS
Arabidopsis Description
actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.