Factsheet for TraesCS5D01G089100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G075500.1	Wheat	cytosol	98.37	98.37
Zm00001d030781_P001	Maize	cytosol	27.78	79.44
PGSC0003DMT400063143	Potato	cytosol	61.11	59.55
Zm00001d030780_P001	Maize	cytosol	29.74	51.12
TraesCS2D01G386600.1	Wheat	cytosol	61.44	48.96
TraesCS2D01G190800.1	Wheat	cytosol	65.03	48.77
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	15.36	38.21
AT5G07780.1	Thale cress	plastid	54.25	35.78
KRH03521	Soybean	plastid	66.67	30.13
AT5G07770.3	Thale cress	plastid	56.54	23.73
AT5G07650.1	Thale cress	cytosol	56.54	21.23
CDY40774	Canola	cytosol	63.73	20.95
AT5G07760.2	Thale cress	cytosol, plastid	52.61	18.57
KRH56878	Soybean	cytosol	66.34	16.82
CDY14029	Canola	cytosol	63.73	15.84
CDX99025	Canola	cytosol	60.13	15.78
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	67.97	15.65
CDX69994	Canola	plastid	60.46	15.59
KRH54596	Soybean	extracellular	65.03	15.46
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	60.46	14.96
HORVU5Hr1G020180.51	Barley	mitochondrion	90.52	14.2
CDX69993	Canola	cytosol	55.56	14.01
TraesCS1D01G077900.1	Wheat	cytosol	61.76	13.49
TraesCS6D01G339300.1	Wheat	cytosol	58.5	13.41
CDX81069	Canola	nucleus	62.42	13.15
CDX99026	Canola	cytosol	54.58	13.14
Bra005952.1-P	Field mustard	nucleus	61.44	12.7
CDX78309	Canola	nucleus	61.76	12.63
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	70.59	12.37
KXG23793	Sorghum	cytosol	80.39	12.2
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.73	11.99
AT5G07740.2	Thale cress	nucleus	63.07	11.47
Zm00001d041515_P003	Maize	mitochondrion	80.07	11.45
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	26.14	10.18
TraesCS1D01G010200.1	Wheat	plastid	18.63	10.04
TraesCS4D01G257700.1	Wheat	plasma membrane	25.49	8.8
TraesCS3D01G391800.1	Wheat	mitochondrion	26.14	8.4
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	22.55	8.12
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	22.22	8.08
TraesCS2D01G220300.1	Wheat	plasma membrane	25.16	8.05
TraesCS1D01G329400.1	Wheat	plastid	21.9	8.03
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	23.2	7.88
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	24.84	7.41
TraesCS4D01G237900.1	Wheat	plastid	12.75	4.3
KRH63288	Soybean	cytosol	6.54	2.11
TraesCS2D01G386500.1	Wheat	cytosol	0.98	0.62
Os04t0245000-00	Rice	plasma membrane	1.31	0.31
KRH03523	Soybean	cytosol	0.33	0.14
TraesCS2D01G190700.1	Wheat	cytosol	0.0	0.0
TraesCS7D01G150000.1	Wheat	mitochondrion	0.0	0.0
CDY02798	Canola	cytosol	0.0	0.0
Bra020386.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5D01G089100.1	EnsemblPlantsGene:TraesCS5D01G089100	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil
PANTHER:PTHR23213	PANTHER:PTHR23213:SF218	PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	MapMan:20.2.2.6.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:95860279..95878697

Molecular Weight (calculated)

34400.6 Da

IEP (calculated)

5.051

GRAVY (calculated)

-0.183

Length

306 amino acids

Sequence
(BLAST)

001: MSLENPQMDI RRANNTEIML TKIKMPLSEM MSAALALDDS ILDADQVENL IKFCPTKEEM DLLKNFTGDK ETLGKCEQFF LELMKVPRIE SKFRIFAFKI
101: QFQTQIRDVR KNLLTVAAAC EELRGSEKLK VIMKNILLIG NTLNEGTPRG QAVGFRLDSI LKLVETRATS SRTTLMHFLC KSLAGKSPEL LDFHEDLVSL
201: EAASKLQLKA LAEEQQAVVK GLEKVEQELT ASETDGPVSD VFRKTLKEFL DDSGADVRAL SALYADVGRS ADAISLYFGE DPAKYPFEQG NFHAKLSIES
301: VYVRWF

Best Arabidopsis Sequence Match ( AT3G32400.2 )
(BLAST)

001: MDIRELIDIT ELSSIATEGP PPPPPPPLLQ PHHSALSSSP LPPPLPPKKL LATTNTPPPP PPPLHSNSQM GAPTSSLVLK SPHNLKGQGQ TRKANLKPYH
101: WLKLTRAVQG SLWAEAQKSD EAATAPDFDI SEIEKLFSAV NLSSNSENNG GKSGRRARPK VEKVQLIELK RAYNCEIMLS KVKIPLPDLM SSVLALDESV
201: IDVDQVDNLI KFCPTKEEAE LLKGFIGNKE TLGRCEQFFL ELLKVPRVET KLRVFSFKIQ FHSQVTDLRR GLNTIHSATN EVRGSTKLKR IMQTILSLGN
301: ALNHGTARGS AIGFHLDSLL KLTDTRSRNS KMTLMHYLCK VLAEKLPGLL NFPKDMVSLE AATNIQLKYL AEEMQATSKG LEKVVQEFTA SETDCQISKH
401: FHMNLKEFLS VAEGEVRSLA SLYSTVGGSA DALALYFGED PARVPFEQVV STLQNFVRIF VRSHEENCKQ VEFEKKRAQK EAENEKLKKG VYNEN

Arabidopsis Description

FH17Formin-like protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.