Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 6
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063143 | Potato | cytosol | 44.18 | 65.29 |
| Zm00001d030781_P001 | Maize | cytosol | 14.44 | 62.62 |
| PGSC0003DMT400083163 | Potato | cytosol, mitochondrion, nucleus | 14.87 | 56.1 |
| TraesCS5D01G089100.1 | Wheat | cytosol | 35.78 | 54.25 |
| Solyc03g115680.2.1 | Tomato | plastid | 55.17 | 49.23 |
| GSMUA_Achr7P26410_001 | Banana | endoplasmic reticulum, golgi | 51.08 | 48.77 |
| Zm00001d030780_P001 | Maize | cytosol | 17.67 | 46.07 |
| AT5G07770.3 | Thale cress | plastid | 70.91 | 45.13 |
| AT3G32400.2 | Thale cress | cytosol | 47.41 | 44.44 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 77.8 | 41.64 |
| KRH03521 | Soybean | plastid | 59.05 | 40.47 |
| AT5G07650.1 | Thale cress | cytosol | 65.95 | 37.55 |
| AT1G42980.1 | Thale cress | cytosol | 22.41 | 34.78 |
| VIT_17s0000g06640.t01 | Wine grape | cytosol, mitochondrion, plasma membrane, plastid | 62.72 | 21.9 |
| KRH54596 | Soybean | extracellular | 60.34 | 21.76 |
| GSMUA_Achr3P30260_001 | Banana | mitochondrion, plasma membrane | 50.43 | 21.63 |
| AT2G25050.1 | Thale cress | cytosol | 53.45 | 21.23 |
| GSMUA_Achr6P16780_001 | Banana | cytosol | 52.37 | 20.72 |
| AT1G31810.1 | Thale cress | cytosol | 52.59 | 19.84 |
| KRH56878 | Soybean | cytosol | 51.51 | 19.8 |
| AT5G07740.2 | Thale cress | nucleus | 68.1 | 18.78 |
| AT5G58160.1 | Thale cress | cytosol | 50.65 | 18.56 |
| Os07t0596300-02 | Rice | plastid | 57.76 | 16.47 |
| OQU90190 | Sorghum | cytosol | 57.54 | 16.26 |
| Zm00001d006758_P003 | Maize | cytosol | 55.6 | 15.92 |
| Zm00001d022040_P002 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 57.54 | 15.72 |
| GSMUA_Achr4P32680_001 | Banana | cytosol, mitochondrion | 54.53 | 14.49 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 15.09 | 13.21 |
| AT3G25493.1 | Thale cress | vacuole | 4.53 | 13.12 |
| HORVU5Hr1G020180.51 | Barley | mitochondrion | 54.09 | 12.87 |
| KXG23793 | Sorghum | cytosol | 54.53 | 12.55 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 23.92 | 12.33 |
| Zm00001d041515_P003 | Maize | mitochondrion | 55.39 | 12.01 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 19.61 | 11.97 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 22.84 | 11.79 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 21.55 | 11.31 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 21.12 | 10.96 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 18.1 | 10.74 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 23.49 | 10.37 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 10.13 | 10.09 |
| AT1G59910.1 | Thale cress | nucleus | 20.04 | 10.01 |
| AT3G07540.1 | Thale cress | plasma membrane | 16.16 | 8.92 |
| KRH63288 | Soybean | cytosol | 16.59 | 8.14 |
| Solyc07g005500.2.1 | Tomato | cytosol | 6.25 | 5.24 |
| Os04t0245000-00 | Rice | plasma membrane | 8.84 | 3.23 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 3.02 | 3.03 |
| KRH03523 | Soybean | cytosol | 2.16 | 1.41 |
| TraesCS6A01G357300.1 | Wheat | endoplasmic reticulum, golgi | 0.86 | 1.2 |
| AT3G32420.1 | Thale cress | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.2 | EntrezGene:830671 | ProteinID:AED91203.1 | EMBL:AK221526 | ArrayExpress:AT5G07780 |
| EnsemblPlantsGene:AT5G07780 | RefSeq:AT5G07780 | TAIR:AT5G07780 | RefSeq:AT5G07780-TAIR-G | EnsemblPlants:AT5G07780.1 | TAIR:AT5G07780.1 |
| Unigene:At.32673 | ProteinID:BAB09942.1 | ncoils:Coil | InterPro:FH2_Formin | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0045010 |
| GO:GO:0051016 | InterPro:IPR015425 | RefSeq:NP_196395.1 | PFAM:PF02181 | PO:PO:0007611 | PO:PO:0009005 |
| PO:PO:0009046 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF321 | UniProt:Q9FF14 | SMART:SM00498 |
| SUPFAM:SSF101447 | UniParc:UPI00000A5349 | SEG:seg | : | : | : |
Description
FH19Formin-like protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF14]
Coordinates
chr5:+:2479514..2482850
Molecular Weight (calculated)
52413.3 Da
IEP (calculated)
9.516
GRAVY (calculated)
-0.389
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVDISGAY SLVPLPPPPP PLMRRRAPLP PPPPPPLMRR RAPPPPPPPL MRRRAPPPPP PPPLPRPCSR PPKTKCSLKP LHWVKKTRAL PGSLWDELQR
101: RQECRDIEDE QILCAIELSV SEIETIFSLG AKPKPKPEPE KVPLIDLRRA TNTEIRLMLL NIRLPDMIAA AMAMDESRLD DFDQIENLIN LFPTKEDMKF
201: LLTYTGDKGN CEQLFQYLQE VVKVPRVESK LRVFSFKIQF GTQITKLTKG LNAVNSACEE IRTSQKLKDI MENILCLGNI LNQGTGRGRA VGFRLDSLLI
301: LSETRADNSK MTLMHYLCKV LASKASDLLD FHKDLESLES ASKIQLKSLA EEIQAITKGL EKLKQELTAS ETDGPVSQVF RKLLKEFISN AETQVATVMA
401: LYYPARGNAE ALAHYFGYHY PFEQVTATLL SFIRLFKKAH EENVKQAELE KKKAAKEAEM EKTK
101: RQECRDIEDE QILCAIELSV SEIETIFSLG AKPKPKPEPE KVPLIDLRRA TNTEIRLMLL NIRLPDMIAA AMAMDESRLD DFDQIENLIN LFPTKEDMKF
201: LLTYTGDKGN CEQLFQYLQE VVKVPRVESK LRVFSFKIQF GTQITKLTKG LNAVNSACEE IRTSQKLKDI MENILCLGNI LNQGTGRGRA VGFRLDSLLI
301: LSETRADNSK MTLMHYLCKV LASKASDLLD FHKDLESLES ASKIQLKSLA EEIQAITKGL EKLKQELTAS ETDGPVSQVF RKLLKEFISN AETQVATVMA
401: LYYPARGNAE ALAHYFGYHY PFEQVTATLL SFIRLFKKAH EENVKQAELE KKKAAKEAEM EKTK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.