Factsheet for AT5G54650.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular, nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42470	Canola	plasma membrane	82.0	85.91
Bra002969.1-P	Field mustard	plasma membrane	83.67	85.86
CDY18346	Canola	plasma membrane	82.67	85.32
CDY43029	Canola	plasma membrane	78.67	82.04
Bra029012.1-P	Field mustard	plasma membrane	78.11	81.84
CDY43811	Canola	golgi	77.22	81.48
PGSC0003DMT400083315	Potato	cytosol	15.11	73.12
PGSC0003DMT400036575	Potato	mitochondrion	21.33	67.13
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	35.89	64.73
PGSC0003DMT400039073	Potato	cytosol	17.33	57.78
PGSC0003DMT400031544	Potato	cytosol	28.11	55.73
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	29.0	52.52
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	35.56	49.31
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	46.44	47.99
Solyc10g006540.2.1	Tomato	extracellular	49.22	47.48
Solyc07g064010.2.1	Tomato	golgi	46.22	46.79
KRH27118	Soybean	plasma membrane	45.22	45.07
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	45.22	44.87
KRH55607	Soybean	plasma membrane	47.44	43.66
KRH25896	Soybean	plasma membrane	47.0	43.47
Os04t0100300-00	Rice	plasma membrane	36.56	39.98
GSMUA_Achr2P14090_001	Banana	mitochondrion	28.89	39.1
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	38.56	38.26
AT4G15200.2	Thale cress	extracellular, golgi, plasma membrane	19.78	38.2
EES10325	Sorghum	golgi	40.33	37.66
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	39.56	37.63
Os07t0545500-01	Rice	plasma membrane	38.67	37.46
TraesCS6B01G163200.1	Wheat	plasma membrane	35.11	37.44
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.33	37.41
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.33	37.41
HORVU0Hr1G015390.6	Barley	cytosol, plasma membrane, plastid	34.67	37.32
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	38.22	37.31
Os02t0161100-01	Rice	golgi	35.78	36.55
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	37.0	35.2
Zm00001d024947_P005	Maize	plasma membrane	39.22	35.19
TraesCS2B01G239500.1	Wheat	plasma membrane	36.67	35.07
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	39.33	34.5
TraesCS2D01G220300.1	Wheat	plasma membrane	36.67	34.48
EES04559	Sorghum	plasma membrane	32.67	34.43
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	39.33	34.1
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	39.44	33.87
HORVU2Hr1G043830.5	Barley	cytosol, nucleus, plastid	36.56	32.0
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	29.67	29.7
Zm00001d015326_P003	Maize	mitochondrion, plastid	33.11	29.45
AT1G70140.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	24.67	29.21
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	27.67	28.17
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	27.11	27.29
AT1G24150.2	Thale cress	endoplasmic reticulum	15.56	26.42
AT3G25493.1	Thale cress	vacuole	4.33	24.38
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.33	24.26
AT5G07780.1	Thale cress	plastid	12.33	23.92
AT5G48360.1	Thale cress	extracellular, vacuole	20.78	23.91
AT3G32400.2	Thale cress	cytosol	12.56	22.83
AT1G59910.1	Thale cress	nucleus	23.56	22.82
AT3G07540.1	Thale cress	plasma membrane	19.33	20.69
AT1G42980.1	Thale cress	cytosol	5.89	17.73
AT5G07770.3	Thale cress	plastid	12.78	15.78
HORVU2Hr1G006690.1	Barley	peroxisome	15.22	15.69
AT1G31810.1	Thale cress	cytosol	19.11	13.98
AT2G25050.1	Thale cress	cytosol	17.67	13.61
AT5G58160.1	Thale cress	cytosol	18.67	13.27
AT5G07760.2	Thale cress	cytosol, plastid	12.11	12.57
AT5G07650.1	Thale cress	cytosol	11.11	12.27
AT5G07740.2	Thale cress	nucleus	19.78	10.58
AT3G32420.1	Thale cress	cytosol	0.67	5.61

Protein Annotations

MapMan:20.2.2.6.1	EntrezGene:835554	ProteinID:AAT37554.1	ProteinID:AED96522.1	ProteinID:AED96523.1	EMBL:AK228971
ArrayExpress:AT5G54650	EnsemblPlantsGene:AT5G54650	RefSeq:AT5G54650	TAIR:AT5G54650	RefSeq:AT5G54650-TAIR-G	EnsemblPlants:AT5G54650.1
TAIR:AT5G54650.1	EMBL:AY042801	EMBL:AY128923	EMBL:AY581683	Unigene:At.6921	ProteinID:BAB09344.1
InterPro:FH2_Formin	Symbol:Fh5	GO:GO:0000003	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007275	GO:GO:0008150	GO:GO:0009524	GO:GO:0009653	GO:GO:0009791	GO:GO:0009960
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030041	GO:GO:0030312
GO:GO:0045010	GO:GO:0048317	InterPro:IPR015425	RefSeq:NP_200276.1	RefSeq:NP_851191.1	PFAM:PF02181
PO:PO:0000013	PO:PO:0000037	PO:PO:0000201	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR01217	PFscan:PS51444
PANTHER:PTHR23213	PANTHER:PTHR23213:SF195	UniProt:Q94B77	SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00000A7512	SEG:seg	:	:	:

Description

FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]

Coordinates

chr5:-:22197530..22202127

Molecular Weight (calculated)

98363.4 Da

IEP (calculated)

8.948

GRAVY (calculated)

-0.541

Length

900 amino acids

Sequence
(BLAST)

001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.