Factsheet for PGSC0003DMT400036575

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083315	Potato	cytosol	42.31	65.05
PGSC0003DMT400067386	Potato	cytosol	58.74	48.41
PGSC0003DMT400031544	Potato	cytosol	64.34	40.53
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	69.23	39.68
PGSC0003DMT400039073	Potato	cytosol	36.01	38.15
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	52.8	30.38
Solyc10g006540.2.1	Tomato	extracellular	96.5	29.58
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	80.42	26.41
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	59.09	26.04
PGSC0003DMT400056393	Potato	cytosol	43.36	25.83
CDY43811	Canola	golgi	66.08	22.16
Bra029012.1-P	Field mustard	plasma membrane	66.43	22.12
CDY43029	Canola	plasma membrane	66.43	22.02
AT5G54650.1	Thale cress	extracellular, mitochondrion, nucleus, plasma membrane	67.13	21.33
CDY18346	Canola	plasma membrane	64.34	21.1
CDY42470	Canola	plasma membrane	63.29	21.07
Bra002969.1-P	Field mustard	plasma membrane	64.34	20.98
KRH27118	Soybean	plasma membrane	65.73	20.82
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	64.69	20.4
KRH25896	Soybean	plasma membrane	65.73	19.32
KRH55607	Soybean	plasma membrane	65.73	19.22
PGSC0003DMT400036332	Potato	plasma membrane	61.19	18.96
Os04t0100300-00	Rice	plasma membrane	54.2	18.83
Os07t0545500-01	Rice	plasma membrane	60.14	18.51
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	58.39	18.41
HORVU0Hr1G015390.6	Barley	cytosol, plasma membrane, plastid	53.5	18.3
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	60.49	18.29
TraesCS6B01G163200.1	Wheat	plasma membrane	53.85	18.25
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	53.85	18.12
EES10325	Sorghum	golgi	60.84	18.05
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	53.5	18.0
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.39	17.65
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	56.64	17.57
TraesCS2B01G239500.1	Wheat	plasma membrane	56.99	17.32
Zm00001d024947_P005	Maize	plasma membrane	60.49	17.25
EES04559	Sorghum	plasma membrane	51.4	17.21
TraesCS2D01G220300.1	Wheat	plasma membrane	56.99	17.03
Os02t0161100-01	Rice	golgi	52.45	17.03
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	60.14	16.57
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	59.44	16.57
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	60.14	16.41
HORVU2Hr1G043830.5	Barley	cytosol, nucleus, plastid	58.04	16.15
PGSC0003DMT400029052	Potato	cytosol	15.38	15.94
PGSC0003DMT400063143	Potato	cytosol	16.78	15.29
PGSC0003DMT400058304	Potato	plasma membrane	41.26	14.75
Zm00001d015326_P003	Maize	mitochondrion, plastid	52.1	14.72
PGSC0003DMT400020452	Potato	cytosol	8.39	14.55
PGSC0003DMT400013717	Potato	plastid	43.36	14.4
PGSC0003DMT400038519	Potato	endoplasmic reticulum	43.36	14.07
PGSC0003DMT400055250	Potato	vacuole	42.66	13.77
PGSC0003DMT400063542	Potato	extracellular, golgi, plasma membrane	42.66	13.56
PGSC0003DMT400063186	Potato	plastid	35.31	13.38
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	34.97	13.24
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	5.59	13.01
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	41.96	12.71
PGSC0003DMT400079306	Potato	cytosol	16.78	11.91
GSMUA_Achr2P14090_001	Banana	mitochondrion	25.87	11.13
PGSC0003DMT400079305	Potato	cytosol, mitochondrion, plastid	3.15	1.15
HORVU2Hr1G006690.1	Barley	peroxisome	0.35	0.11

Protein Annotations

EnsemblPlants:PGSC0003DMT400036575	EnsemblPlantsGene:PGSC0003DMG400014098	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213
PANTHER:PTHR23213:SF195	PFAM:PF02181	PFscan:PS51444	PGSC:PGSC0003DMG400014098	SEG:seg	SUPFAM:SSF101447
UniParc:UPI00029536A9	UniProt:M1B3V0	MapMan:20.2.2.6.1	:	:	:

Description

Actin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014098]

Coordinates

chr00:-:31878056..31879257

Molecular Weight (calculated)

31995.1 Da

IEP (calculated)

6.543

GRAVY (calculated)

-0.476

Length

286 amino acids

Sequence
(BLAST)

001: MLQAACTELR KSRLFHKLLE AVLKTGNRMN DGTFRGGAQA FKLDTLLKLS DVKGIDGKTT LLHFVVQEII RSEGIRAARA RDRGSVSSIK SDDLPEDQSQ
101: DAEEYYRSTG LQVVSGLSSE IENVKKAAIL DADSLTGTVS KLGRALKESR DFLNSEMKNV DDENRFHQTL KIFVQNAELD IMWLFEEEKR IMALVKSTGD
201: YFHGNAGKDE GLRLFVIVRD FLIILDKVCI EVKNAQRKLN GTPKKENVAS KTSESTNPPP LDLRQKLFPA ITDRRIDDSS SDDDAS

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.