Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g092470.2.1 | Tomato | nucleus | 96.73 | 96.4 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 25.85 | 69.18 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 66.14 | 66.14 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 63.54 | 63.9 |
| CDY37849 | Canola | endoplasmic reticulum | 37.81 | 63.81 |
| CDY08720 | Canola | mitochondrion | 50.45 | 61.49 |
| KRH28364 | Soybean | vacuole | 61.4 | 60.78 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 60.72 | 60.52 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 56.66 | 59.76 |
| KRH04437 | Soybean | plastid, vacuole | 59.26 | 59.39 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 30.7 | 59.13 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 59.14 | 58.29 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 58.47 | 58.27 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 58.92 | 57.87 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 58.01 | 57.3 |
| HORVU4Hr1G069940.1 | Barley | plastid | 36.46 | 55.79 |
| PGSC0003DMT400056393 | Potato | cytosol | 30.02 | 55.42 |
| PGSC0003DMT400083315 | Potato | cytosol | 11.63 | 55.38 |
| Os03t0204100-01 | Rice | plasma membrane | 47.29 | 46.97 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 46.84 | 46.84 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 46.95 | 46.74 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 47.07 | 46.49 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 46.84 | 46.47 |
| Zm00001d028089_P001 | Maize | plasma membrane | 46.16 | 46.37 |
| Bra031838.1-P | Field mustard | cytosol | 22.35 | 45.0 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 42.21 | 44.79 |
| KXG39923 | Sorghum | mitochondrion | 47.52 | 44.74 |
| Zm00001d048142_P001 | Maize | plasma membrane | 43.45 | 44.72 |
| Zm00001d032545_P001 | Maize | plasma membrane | 42.55 | 43.89 |
| PGSC0003DMT400067386 | Potato | cytosol | 16.93 | 43.23 |
| HORVU1Hr1G077850.2 | Barley | mitochondrion | 34.88 | 43.22 |
| Os07t0588200-01 | Rice | golgi, plasma membrane, vacuole | 37.36 | 42.76 |
| KXG38231 | Sorghum | plastid | 43.45 | 42.68 |
| PGSC0003DMT400036575 | Potato | mitochondrion | 13.77 | 42.66 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 38.6 | 42.54 |
| PGSC0003DMT400064911 | Potato | endoplasmic reticulum, plasma membrane | 36.23 | 42.52 |
| Os10t0347800-00 | Rice | cytosol, nucleus, plastid | 40.29 | 41.75 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 36.57 | 41.38 |
| HORVU2Hr1G035230.1 | Barley | golgi, plasma membrane, plastid | 36.68 | 41.3 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 38.83 | 41.25 |
| Zm00001d021985_P001 | Maize | plasma membrane | 36.91 | 41.24 |
| PGSC0003DMT400013717 | Potato | plastid | 40.07 | 41.23 |
| PGSC0003DMT400039073 | Potato | cytosol | 12.53 | 41.11 |
| EER97466 | Sorghum | plasma membrane | 36.79 | 41.06 |
| TraesCS2A01G193700.1 | Wheat | golgi | 36.34 | 41.02 |
| TraesCS1D01G329400.1 | Wheat | plastid | 37.58 | 39.93 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 40.52 | 38.03 |
| PGSC0003DMT400031544 | Potato | cytosol | 18.28 | 35.68 |
| PGSC0003DMT400063542 | Potato | extracellular, golgi, plasma membrane | 32.96 | 32.44 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 25.96 | 28.75 |
| PGSC0003DMT400049488 | Potato | golgi, plasma membrane, vacuole | 27.77 | 28.24 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 28.56 | 27.41 |
| PGSC0003DMT400063186 | Potato | plastid | 23.14 | 27.15 |
| PGSC0003DMT400063143 | Potato | cytosol | 8.58 | 24.2 |
| PGSC0003DMT400029052 | Potato | cytosol | 7.11 | 22.83 |
| PGSC0003DMT400079306 | Potato | cytosol | 9.93 | 21.84 |
| PGSC0003DMT400020452 | Potato | cytosol | 3.05 | 16.36 |
| PGSC0003DMT400083163 | Potato | cytosol, mitochondrion, nucleus | 2.14 | 15.45 |
| PGSC0003DMT400079305 | Potato | cytosol, mitochondrion, plastid | 7.79 | 8.82 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400055250 | EnsemblPlantsGene:PGSC0003DMG400021449 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | PFAM:PF02181 |
| PFscan:PS51444 | PGSC:PGSC0003DMG400021449 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 |
| TMHMM:TMhelix | UniParc:UPI000296B39F | UniProt:M1BXN4 | MapMan:20.2.2.6.1 | : | : |
Description
Formin 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400021449]
Coordinates
chr2:-:42781954..42787833
Molecular Weight (calculated)
97890.5 Da
IEP (calculated)
9.636
GRAVY (calculated)
-0.606
Length
886 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAAGLSIFF ILSLLSSFTS QFQDLVVKEK TRRILHQPLF PVSSTPPPDS EISPPPPAEP VNSQPFFPEV PTGTTPDQTH QPPVTPANGT PVSNSVATQP
101: AKPVKKVAIA ISVGIVTLGM LSALAFYLYK HRVKHPDETQ KLVRGNSDQR INEESRTPPS TFLYIGTVEP PAKTSAVTES NGATGSPYRK LSSVKRMDTR
201: YRPSPDLQPL PPLSKPQPPP SINSPTAMSS SDEESHDTAF HTPQGSTVSN EEGYYTPSLR ESYSSNKNYV PYSKRTSPRS RLSDSSPEVK HSIIPSIKQA
301: PAPPLPPRQP QGGLIEQLPP EPPLQYTRPE LPYVTKRAKF SSPPPPPDMT RLQLISNQAQ QILKTTPPPP PPPPPPPLPL STPHKPEGSQ RNVPSAAYQQ
401: MVKTESRSPT PKSTPGSEKT STSEEQNGGA SSLERHDSSD TDPSKPKLKP LHWDKVRATS DRATVWDQLK SSSFQLNEDM MESLFGCNSA NSVPKEATRK
501: SVLPPAEKDN KVLDPKKSQN IAIMLRALNV TKDEVTEALL NGNPEGLGPE LLETLVKMAP TKEEEIKLRE YSEDASKLGS AERFLKTVLD LPFAFKRVEV
601: MLYRANFDGE VKDLRKSFQT LEVASEELKN SRLFLKLLEA VLRTGNRMNV GTNRGDARAF KLDTLLKLVD IKGTDGKTTL LHFVVQEIIR SEELDSEPPG
701: EDLSNKANIK FKEEDFKKQG LQVVSGLSRE LGNVKKAAAM DSDVLGSYVL KLAVGLDKAR SVLQYEKQGL QGNFFESMKV FLKEAEDGIV RIRAEERKAL
801: SMVKQVTEYF HGDAAKEEAH PLRIFVIVRD FLSILDNVCK DVRRMQDQTV VGGARSFRIA ATASLPVLSR YNVKQKRSWD DNSSSP
101: AKPVKKVAIA ISVGIVTLGM LSALAFYLYK HRVKHPDETQ KLVRGNSDQR INEESRTPPS TFLYIGTVEP PAKTSAVTES NGATGSPYRK LSSVKRMDTR
201: YRPSPDLQPL PPLSKPQPPP SINSPTAMSS SDEESHDTAF HTPQGSTVSN EEGYYTPSLR ESYSSNKNYV PYSKRTSPRS RLSDSSPEVK HSIIPSIKQA
301: PAPPLPPRQP QGGLIEQLPP EPPLQYTRPE LPYVTKRAKF SSPPPPPDMT RLQLISNQAQ QILKTTPPPP PPPPPPPLPL STPHKPEGSQ RNVPSAAYQQ
401: MVKTESRSPT PKSTPGSEKT STSEEQNGGA SSLERHDSSD TDPSKPKLKP LHWDKVRATS DRATVWDQLK SSSFQLNEDM MESLFGCNSA NSVPKEATRK
501: SVLPPAEKDN KVLDPKKSQN IAIMLRALNV TKDEVTEALL NGNPEGLGPE LLETLVKMAP TKEEEIKLRE YSEDASKLGS AERFLKTVLD LPFAFKRVEV
601: MLYRANFDGE VKDLRKSFQT LEVASEELKN SRLFLKLLEA VLRTGNRMNV GTNRGDARAF KLDTLLKLVD IKGTDGKTTL LHFVVQEIIR SEELDSEPPG
701: EDLSNKANIK FKEEDFKKQG LQVVSGLSRE LGNVKKAAAM DSDVLGSYVL KLAVGLDKAR SVLQYEKQGL QGNFFESMKV FLKEAEDGIV RIRAEERKAL
801: SMVKQVTEYF HGDAAKEEAH PLRIFVIVRD FLSILDNVCK DVRRMQDQTV VGGARSFRIA ATASLPVLSR YNVKQKRSWD DNSSSP
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.