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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • plastid 1
  • mitochondrion 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024447.1-P Field mustard extracellular, plasma membrane, vacuole 99.72 80.83
CDY36494 Canola endoplasmic reticulum, vacuole 97.8 78.82
CDY37849 Canola endoplasmic reticulum 56.67 78.48
CDY43578 Canola endoplasmic reticulum, extracellular 84.18 72.86
AT5G67470.1 Thale cress extracellular, plasma membrane, vacuole 89.0 71.97
GSMUA_Achr7P26240_001 Banana cytosol 32.6 71.6
GSMUA_Achr4P07090_001 Banana cytosol 37.96 60.0
VIT_07s0129g00220.t01 Wine grape endoplasmic reticulum, extracellular 65.75 53.95
HORVU4Hr1G069940.1 Barley plastid 42.23 53.02
PGSC0003DMT400055250 Potato vacuole 61.49 50.45
KRH77115 Soybean endoplasmic reticulum, golgi, vacuole 61.49 50.28
KRH28364 Soybean vacuole 61.76 50.17
Solyc02g092470.2.1 Tomato nucleus 60.66 49.61
KRH04437 Soybean plastid, vacuole 59.56 48.98
KRH58088 Soybean endoplasmic reticulum, golgi, vacuole 59.42 48.59
PGSC0003DMT400038519 Potato endoplasmic reticulum 57.77 47.67
Solyc03g044060.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 56.67 47.52
Os03t0204100-01 Rice plasma membrane 51.44 41.93
TraesCS4D01G257700.1 Wheat plasma membrane 50.89 41.76
TraesCS4A01G047000.1 Wheat extracellular, plasma membrane, vacuole 50.76 41.46
HORVU4Hr1G069930.2 Barley golgi, mitochondrion, plasma membrane 50.76 41.14
CDX94358 Canola mitochondrion, plastid 8.8 41.03
TraesCS4B01G257800.1 Wheat plasma membrane 50.21 40.87
Zm00001d028089_P001 Maize plasma membrane 49.24 40.59
HORVU1Hr1G077850.2 Barley mitochondrion 39.89 40.56
Zm00001d013926_P001 Maize extracellular, plasma membrane 46.35 40.36
Zm00001d048142_P001 Maize plasma membrane 46.63 39.37
KXG39923 Sorghum mitochondrion 50.76 39.21
KXG38231 Sorghum plastid 47.18 38.03
Zm00001d032545_P001 Maize plasma membrane 44.7 37.83
TraesCS1A01G327400.1 Wheat plasma membrane 41.82 37.81
Os10t0347800-00 Rice cytosol, nucleus, plastid 44.29 37.66
TraesCS2B01G213200.1 Wheat plasma membrane 39.89 37.04
Os07t0588200-01 Rice golgi, plasma membrane, vacuole 39.34 36.95
TraesCS2A01G193700.1 Wheat golgi 39.75 36.82
Zm00001d021985_P001 Maize plasma membrane 40.03 36.7
HORVU2Hr1G035230.1 Barley golgi, plasma membrane, plastid 39.48 36.47
EER97466 Sorghum plasma membrane 39.75 36.4
TraesCS1B01G340800.1 Wheat mitochondrion 41.27 35.97
TraesCS1D01G329400.1 Wheat plastid 40.44 35.25
CDY70125 Canola cytosol 22.83 34.58
CDY17909 Canola golgi, vacuole 39.34 33.73
CDX79799 Canola mitochondrion, plastid, vacuole 36.73 33.63
CDY44259 Canola plasma membrane, vacuole 37.96 32.74
CDX83457 Canola golgi, plasma membrane, vacuole 37.69 32.5
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 44.98 30.88
CDY05170 Canola extracellular, golgi, plasma membrane 31.09 30.34
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 44.84 30.3
CDY27766 Canola golgi, plasma membrane, vacuole 32.46 29.65
CDY22934 Canola nucleus, plastid 28.75 28.67
CDX74041 Canola golgi, plasma membrane, plastid 27.79 28.33
CDY07990 Canola golgi, plasma membrane, plastid 28.06 28.25
CDY35941 Canola plastid 29.02 28.17
CDX74146 Canola extracellular, golgi, plasma membrane 30.95 28.02
CDY40709 Canola endoplasmic reticulum, plasma membrane, vacuole 31.36 27.91
CDX85333 Canola plasma membrane 31.5 27.82
CDY28040 Canola plastid 29.44 27.79
CDY43811 Canola golgi 32.46 27.67
CDY43029 Canola plasma membrane 32.74 27.58
CDX86310 Canola endoplasmic reticulum, plasma membrane 30.54 27.51
CDY08280 Canola endoplasmic reticulum, golgi, plasma membrane 29.85 27.23
CDY42470 Canola plasma membrane 31.91 27.01
CDY18346 Canola plasma membrane 32.05 26.72
CDY11614 Canola endoplasmic reticulum, plasma membrane, vacuole 28.34 26.55
CDY06511 Canola endoplasmic reticulum, golgi, plasma membrane 29.16 26.53
CDY31597 Canola mitochondrion 23.11 26.42
CDY55061 Canola mitochondrion, nucleus 25.58 25.0
CDY53556 Canola nucleus 28.75 24.73
CDY38795 Canola endoplasmic reticulum, golgi, plasma membrane 21.05 24.36
CDY16239 Canola vacuole 23.11 23.93
CDY14670 Canola endoplasmic reticulum, golgi, vacuole 26.0 23.86
CDY33614 Canola mitochondrion, nucleus 24.9 23.51
CDY24501 Canola mitochondrion, nucleus 25.72 23.11
CDY27130 Canola cytosol, mitochondrion 9.9 18.32
CDX99029 Canola cytosol 0.28 12.5
CDY12361 Canola cytosol 18.43 11.94
CDY49153 Canola cytosol 17.19 11.93
CDY34742 Canola cytosol 18.02 11.67
CDX76779 Canola cytosol 17.88 11.64
CDY40774 Canola cytosol 14.44 11.28
CDX99025 Canola cytosol 17.88 11.15
CDY14029 Canola cytosol 18.57 10.97
CDX69994 Canola plastid 17.74 10.87
CDY02799 Canola cytosol 18.57 10.79
CDY12294 Canola cytosol 18.02 10.75
CDY32721 Canola cytosol 18.29 10.69
CDY62689 Canola cytosol 18.98 10.68
CDY43877 Canola cytosol 18.29 10.09
CDX81069 Canola nucleus 18.71 9.37
CDX69993 Canola cytosol 15.41 9.23
CDX78309 Canola nucleus 18.98 9.22
CDX99026 Canola cytosol 15.82 9.05
CDX69992 Canola cytosol 6.05 5.81
CDY02798 Canola cytosol 2.75 4.08
CDX99027 Canola nucleus 2.2 1.85
Protein Annotations
EnsemblPlants:CDY08720EnsemblPlantsGene:GSBRNA2T00000644001Gene3D:1.20.58.2220InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213
PANTHER:PTHR23213:SF261PFAM:PF02181PFscan:PS51444ProteinID:CDY08720ProteinID:CDY08720.1SEG:seg
SMART:SM00498SUPFAM:SSF101447UniParc:UPI0004EF0298UniProt:A0A078F2J0MapMan:20.2.2.6.1:
Description
BnaA06g25040DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2J0]
Coordinates
chrLK031989:+:29736..32903
Molecular Weight (calculated)
80270.0 Da
IEP (calculated)
9.687
GRAVY (calculated)
-0.646
Length
727 amino acids
Sequence
(BLAST)
001: MLSALAFFLY RHKAKHASDT QKLVSRGGDG GSRRFQEDPL PPTSSTFLYM GTVEPSREPA SESIGPVNTS PYRKLNSVTR SDRYRPSPEL QPLPPLAKPP
101: QPSENSPSAL SPSTSSSDEE CRGTAFYTPH GSAISSDDGY YTAFPRSANS NGHSSGSIPH SKRTSPKSKF GSRSPEMKHV IIPSIKQKPP PIQSPPLRGL
201: ETDPYPQNKP KFSQPPPPPN RAAFQAITQD KSPLSTRVSP RSNPEATKPD DQSRKLAFKT PSPQSKAVEE AKSVSADGDT DPSKPKLKPL HWDKVRASSD
301: RATVWDQLKS SSFQVNEDRM EHLFGCSSAS SAPKEPVRRS VMPPAENENR VLDPKKSQNI AILLRALNVT REEVSEALLD GNPESLGAEL LETLVKMAPT
401: KEEEIKLREY SGDVSKLGTA ERFLKTILDI PFAFKRVEAM LYRANFDAEV KYLRNSFQTL EEASLELKAS RLFLKLLEAV LMTGNRMNVG TNRGEAKAFK
501: LDTLLKLVDI KGVDGKTTLL HFVVQEITKS EATTTTIDET ILHENKDGFR KQGLQVVAGL SRDLANVKKS AGMDSDVLSG YVTKLETGLE KLRAFVKTET
601: TTTTPGKFFD SMKTFLKEAE EEIRKIKGGE RKALSMVKEV TEYFHGDAAK EEAHPLRIFM VVRDFLGVLD NVCKEVKTMQ EMSSAMGSAS ARSFRISATA
701: SLPVLHRYKS RQEDTSSDNE HSSNSST
Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [extracellular,plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.