Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 97.98 | 98.42 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 98.31 | 97.98 |
| HORVU4Hr1G069940.1 | Barley | plastid | 62.81 | 96.55 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 95.96 | 95.21 |
| Os03t0204100-01 | Rice | plasma membrane | 80.9 | 80.72 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 28.54 | 76.74 |
| Zm00001d048142_P001 | Maize | plasma membrane | 73.37 | 75.84 |
| Zm00001d028089_P001 | Maize | plasma membrane | 74.83 | 75.51 |
| KXG39923 | Sorghum | mitochondrion | 78.2 | 73.96 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 33.15 | 64.13 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 51.91 | 57.46 |
| CDY37849 | Canola | endoplasmic reticulum | 33.6 | 56.95 |
| CDY08720 | Canola | mitochondrion | 41.46 | 50.76 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 49.78 | 50.0 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 45.84 | 48.57 |
| PGSC0003DMT400055250 | Potato | vacuole | 46.74 | 46.95 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.3 | 46.83 |
| Solyc02g092470.2.1 | Tomato | nucleus | 46.74 | 46.79 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 46.97 | 46.34 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 46.63 | 46.27 |
| KRH04437 | Soybean | plastid, vacuole | 45.51 | 45.81 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 44.27 | 45.44 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 45.28 | 45.33 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 44.94 | 44.99 |
| KRH28364 | Soybean | vacuole | 45.17 | 44.92 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 44.27 | 44.72 |
| TraesCS2A01G193700.1 | Wheat | golgi | 39.21 | 44.46 |
| TraesCS5A01G304700.1 | Wheat | golgi | 36.07 | 40.79 |
| Bra031838.1-P | Field mustard | cytosol | 20.0 | 40.45 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 40.22 | 37.72 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 20.67 | 34.52 |
| TraesCS2A01G337800.1 | Wheat | mitochondrion, plasma membrane | 28.65 | 28.08 |
| TraesCS6A01G135200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 26.18 | 27.41 |
| TraesCS6A01G312000.2 | Wheat | plastid | 26.29 | 25.8 |
| TraesCS2A01G214500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.08 | 25.48 |
| TraesCS5A01G075500.1 | Wheat | cytosol | 8.65 | 25.16 |
| TraesCS2A01G044700.1 | Wheat | extracellular, plasma membrane | 26.97 | 23.12 |
| TraesCS2A01G388800.1 | Wheat | cytosol | 9.78 | 22.77 |
| TraesCS2A01G183000.1 | Wheat | cytosol | 8.99 | 19.61 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 18.88 | 12.1 |
| TraesCS4A01G061100.1 | Wheat | mitochondrion | 8.54 | 8.44 |
| TraesCS2A01G388700.1 | Wheat | cytosol | 3.6 | 6.6 |
| TraesCS6A01G357300.1 | Wheat | endoplasmic reticulum, golgi | 2.25 | 6.01 |
| TraesCS2A01G182900.1 | Wheat | cytosol, golgi, nucleus | 2.13 | 5.35 |
| TraesCS7A01G148100.1 | Wheat | mitochondrion | 2.47 | 4.01 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G047000.1 | EnsemblPlantsGene:TraesCS4A01G047000 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF261 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 |
| SUPFAM:SSF101447 | TMHMM:TMhelix | MapMan:20.2.2.6.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:38640045..38643749
Molecular Weight (calculated)
95221.5 Da
IEP (calculated)
9.265
GRAVY (calculated)
-0.457
Length
890 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAIALLLA QLVLCGCLSP AVSAAAVVPR RVLHQPLFPI EWTPPPSPPP PPAPDFTSDP SPPVATPDAP PVATPDAPPG DFFPPAPPVS SDGGGGGTAS
101: SPPNTVTADV STPPSPTAAG HGPKKATIVA AGAAAAAGVA LLGFACAFLI TGRARRRCDS QKLLGPDGGP ALRRTAPSAA DFLYVGTVEP TTPAHQRGPT
201: SADLAGSPYR KLRNERARRA VCRDEATDHP SPELRPLPPL RRATTMGSSD EDAYYTPRQR SGGSGSGAGG GAGSGVYGET WSEASASSPP TTTTASRRSL
301: PSMTSDFFPP VAAIAALPPP PRSRRTRTPP RTRFSTGSTP DVKQAISPSP RPVQPSNPPP RPPPPPPPPP PPPTAPPKSN AAPRPPPPPP PPPMASTNSL
401: PPKTGEPTSR RRLLKPLPPE GPRIAMPMPI TAAAAAENNG STSMRAEDDA AGGLPKLKPL HWDKVRATSD RAMVWDQLKS SSFQLDEDMI EALFMNNSMP
501: AAPPRDTGRK PAAPAFRQEE RVLDPKKAQN IAILLRALNV TREEVSDALL DGNAECLGSE LLETLVKMAP TKEEEVKLRD YSGDLSKLGT AERFLKTVLD
601: IPFAFKRVDA MLYRANFETE INYLRKSFET LEAACEDLRG SRLFLKLLEA VLRTGNRMNV GTNRGEAKAF KLDTLLKLAD VKGADGKTTL LHFVVQEMIR
701: SEDAKSEKEN TTATSSKDKG LKVVCGLSSE LGNVKKAASM DFDVLHGYVS KLETGLEKIK SVLQLERQCT QGQRFFIAMQ GFLKEADKEI EIVRGEEKRA
801: LGRVKDITDY FHGDAAKEEA HPLRIFMVVR DFLSMLDHVC REVGRMQQDR TVVGSARSFR VSTTAPLPVL SLYGQRRQNN SDDDDDSMSS
101: SPPNTVTADV STPPSPTAAG HGPKKATIVA AGAAAAAGVA LLGFACAFLI TGRARRRCDS QKLLGPDGGP ALRRTAPSAA DFLYVGTVEP TTPAHQRGPT
201: SADLAGSPYR KLRNERARRA VCRDEATDHP SPELRPLPPL RRATTMGSSD EDAYYTPRQR SGGSGSGAGG GAGSGVYGET WSEASASSPP TTTTASRRSL
301: PSMTSDFFPP VAAIAALPPP PRSRRTRTPP RTRFSTGSTP DVKQAISPSP RPVQPSNPPP RPPPPPPPPP PPPTAPPKSN AAPRPPPPPP PPPMASTNSL
401: PPKTGEPTSR RRLLKPLPPE GPRIAMPMPI TAAAAAENNG STSMRAEDDA AGGLPKLKPL HWDKVRATSD RAMVWDQLKS SSFQLDEDMI EALFMNNSMP
501: AAPPRDTGRK PAAPAFRQEE RVLDPKKAQN IAILLRALNV TREEVSDALL DGNAECLGSE LLETLVKMAP TKEEEVKLRD YSGDLSKLGT AERFLKTVLD
601: IPFAFKRVDA MLYRANFETE INYLRKSFET LEAACEDLRG SRLFLKLLEA VLRTGNRMNV GTNRGEAKAF KLDTLLKLAD VKGADGKTTL LHFVVQEMIR
701: SEDAKSEKEN TTATSSKDKG LKVVCGLSSE LGNVKKAASM DFDVLHGYVS KLETGLEKIK SVLQLERQCT QGQRFFIAMQ GFLKEADKEI EIVRGEEKRA
801: LGRVKDITDY FHGDAAKEEA HPLRIFMVVR DFLSMLDHVC REVGRMQQDR TVVGSARSFR VSTTAPLPVL SLYGQRRQNN SDDDDDSMSS
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.