Factsheet for Bra031838.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37849	Canola	endoplasmic reticulum	49.32	41.33
Bra012246.1-P	Field mustard	cytosol	15.91	35.71
CDY43578	Canola	endoplasmic reticulum, extracellular	64.32	33.69
GSMUA_Achr7P26240_001	Banana	cytosol	24.55	32.63
GSMUA_Achr4P07090_001	Banana	cytosol	32.73	31.3
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	58.86	28.87
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	58.64	28.7
HORVU4Hr1G069940.1	Barley	plastid	32.5	24.7
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	48.18	23.93
KRH04437	Soybean	plastid, vacuole	45.68	22.74
PGSC0003DMT400038519	Potato	endoplasmic reticulum	45.23	22.59
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	44.09	22.38
PGSC0003DMT400055250	Potato	vacuole	45.0	22.35
Bra001256.1-P	Field mustard	plastid	19.32	22.31
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	45.0	22.27
Solyc02g092470.2.1	Tomato	nucleus	44.32	21.93
KRH28364	Soybean	vacuole	43.86	21.56
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	43.41	21.48
Bra029655.1-P	Field mustard	cytosol	14.77	21.45
HORVU1Hr1G077850.2	Barley	mitochondrion	33.86	20.84
Zm00001d048142_P001	Maize	plasma membrane	40.68	20.79
Os03t0204100-01	Rice	plasma membrane	41.82	20.63
Zm00001d028089_P001	Maize	plasma membrane	41.14	20.52
TraesCS4D01G257700.1	Wheat	plasma membrane	40.68	20.2
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	40.45	20.0
Zm00001d013926_P001	Maize	extracellular, plasma membrane	37.73	19.88
TraesCS4B01G257800.1	Wheat	plasma membrane	40.23	19.82
KXG39923	Sorghum	mitochondrion	41.82	19.55
Zm00001d021985_P001	Maize	plasma membrane	35.23	19.55
TraesCS1A01G327400.1	Wheat	plasma membrane	35.68	19.53
HORVU4Hr1G069930.2	Barley	golgi, mitochondrion, plasma membrane	39.77	19.51
Os07t0588200-01	Rice	golgi, plasma membrane, vacuole	33.86	19.25
Os10t0347800-00	Rice	cytosol, nucleus, plastid	37.27	19.18
EER97466	Sorghum	plasma membrane	34.55	19.14
KXG38231	Sorghum	plastid	38.86	18.96
TraesCS1B01G340800.1	Wheat	mitochondrion	35.68	18.82
TraesCS1D01G329400.1	Wheat	plastid	35.45	18.7
TraesCS2B01G213200.1	Wheat	plasma membrane	33.18	18.65
TraesCS2A01G193700.1	Wheat	golgi	32.95	18.47
HORVU2Hr1G035230.1	Barley	golgi, plasma membrane, plastid	32.95	18.42
Zm00001d032545_P001	Maize	plasma membrane	35.68	18.28
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	32.73	16.8
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	18.18	16.33
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	31.36	15.42
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	36.82	14.85
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	25.68	13.8
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	25.45	13.61
Bra029012.1-P	Field mustard	plasma membrane	25.45	13.04
Bra024640.1-P	Field mustard	vacuole	21.82	12.9
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	23.86	12.87
Bra002969.1-P	Field mustard	plasma membrane	25.23	12.66
Bra039561.1-P	Field mustard	golgi	23.86	12.54
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	22.27	12.22
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	21.82	11.9
Bra017889.1-P	Field mustard	nucleus	19.55	10.89
Bra038438.1-P	Field mustard	extracellular	7.05	10.23
Bra007822.1-P	Field mustard	cytosol	15.45	6.08
Bra023204.1-P	Field mustard	cytosol	14.55	5.5
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	14.55	5.17
Bra002668.1-P	Field mustard	cytosol	14.77	5.03
Bra020385.1-P	Field mustard	cytosol	13.86	4.37
Bra005952.1-P	Field mustard	nucleus	14.55	4.32
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	14.77	4.0
Bra009307.1-P	Field mustard	cytosol	6.59	3.59
Bra020386.1-P	Field mustard	cytosol	1.59	1.54

Protein Annotations

Gene3D:1.20.58.2220	MapMan:26.8.2.1	Gene3D:3.40.50.10140	EnsemblPlantsGene:Bra031838	EnsemblPlants:Bra031838.1	EnsemblPlants:Bra031838.1-P
ncoils:Coil	InterPro:FH2_Formin	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:IPR000157	InterPro:IPR015425	InterPro:IPR035897
UniProt:M4ESQ8	PFAM:PF01582	PFAM:PF02181	PFscan:PS50104	PANTHER:PTHR23213	PANTHER:PTHR23213:SF261
SMART:SM00498	SUPFAM:SSF101447	SUPFAM:SSF52200	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0002546AD8
SEG:seg	:	:	:	:	:

Description

AT5G67470 (E=7e-079) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA02:-:27611349..27613482

Molecular Weight (calculated)

49710.9 Da

IEP (calculated)

6.373

GRAVY (calculated)

-0.523

Length

440 amino acids

Sequence
(BLAST)

001: MERGEEINPS LVTRIEDSAA SLVVFSPRHA DSHWCLEELA KLCDLSSLLD RSMIPIFYKD KEIQPWRGAM KIVGNLPGYV YREGEDDDEM IGLVVKRVFA
101: EANNTPEQVG EYTVGLESRV DDLEKVGEYT LPYSKSKPKF SQPPNRAAIT QAVEEGERDP SRPKLKPLHW DKVRASSERA TVWDQLKSTF LTHNVFNYLW
201: VLNRVNEDRM GASVWLQLSS KAFKLDTLLK LVDIKGTTLL HFVVQEITRS EVTTTATVDE TTFHGNKDGF RKQGLQVVAG LSRDLANVKK SAGMDSDKLR
301: SFIKTETTTT TTTSTPGKFF DSMKAFLKDA EEEIRKVKGE ERKAMSMVKE VTEYFHGDAA KEEAHPLRIF MVVRDFLGVL DNVCKQVRTM QEMSTTMGSA
401: SARSFRISAT ASLPVLHRYK ARREEEDTSS DDEHSSNSST

Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)

0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S

Arabidopsis Description

FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.