Factsheet for Bra009307.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069660.1.1	Tomato	mitochondrion	20.57	48.82
CDX69992	Canola	cytosol	41.26	43.99
TraesCS2A01G182900.1	Wheat	cytosol, golgi, nucleus	17.97	40.85
TraesCS2D01G190700.1	Wheat	cytosol	17.84	40.56
TraesCS2B01G209500.1	Wheat	cytosol	17.72	40.28
AT3G32420.1	Thale cress	cytosol	5.33	40.19
CDX99027	Canola	nucleus	42.63	39.86
Zm00001d017027_P001	Maize	cytosol	11.65	39.33
Bra020386.1-P	Field mustard	cytosol	19.58	34.65
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	37.17	24.25
Bra005952.1-P	Field mustard	nucleus	40.15	21.89
Bra007822.1-P	Field mustard	cytosol	28.62	20.66
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.27	19.98
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	22.8	19.76
Bra023204.1-P	Field mustard	cytosol	28.38	19.69
Bra002668.1-P	Field mustard	cytosol	30.98	19.35
Bra020385.1-P	Field mustard	cytosol	30.61	17.69
HORVU2Hr1G034470.10	Barley	cytosol	21.69	15.09
Bra038438.1-P	Field mustard	extracellular	4.46	11.88
TraesCS2D01G190800.1	Wheat	cytosol	5.82	11.52
TraesCS2A01G183000.1	Wheat	cytosol	5.82	11.52
TraesCS2B01G209600.1	Wheat	cytosol	5.82	11.52
Solyc06g069670.2.1	Tomato	nucleus	10.53	9.2
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	9.29	9.11
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	9.17	9.04
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	8.8	8.7
Bra024640.1-P	Field mustard	vacuole	7.93	8.6
Bra029012.1-P	Field mustard	plasma membrane	8.8	8.27
Bra039561.1-P	Field mustard	golgi	8.55	8.24
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	8.18	8.23
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	9.05	8.14
Bra002969.1-P	Field mustard	plasma membrane	8.67	7.98
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	10.78	7.97
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	8.18	7.7
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	8.43	7.6
Bra029655.1-P	Field mustard	cytosol	2.48	6.6
Bra031838.1-P	Field mustard	cytosol	3.59	6.59
Bra017889.1-P	Field mustard	nucleus	6.44	6.58
Bra001256.1-P	Field mustard	plastid	2.97	6.3
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	6.07	6.07
Bra012246.1-P	Field mustard	cytosol	1.24	5.1
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	2.97	4.9

Protein Annotations

Gene3D:2.60.40.1110	Gene3D:3.90.190.10	MapMan:35.1	EnsemblPlantsGene:Bra009307	EnsemblPlants:Bra009307.1	EnsemblPlants:Bra009307.1-P
InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	UniProt:M4CYL0	PFAM:PF10409	PFscan:PS51181
PFscan:PS51182	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF49562
InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI000254398D	SEG:seg	:	:

Description

AT2G25050 (E=3e-075) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA10:+:16088693..16093436

Molecular Weight (calculated)

89114.8 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.390

Length

807 amino acids

Sequence
(BLAST)

001: MGEDDYNIYL DGIVGQLHDH YPDASFMVCN FRAGYQRSRI STLLSQYRMS VMDYPNQQGS VPLLPLQVIS QFLISSESWL GQQNVLLMHC ERGSLPLLDF
101: MLSALLLYID RYHGDQKTLE LAYNQGSMEL LRHASSLNPQ PSQLRYLQYI STSSEWPSLE APLLLDCLIL RGLSYFEWRR DWRQSLRVFG QDPKARACRS
201: SILLFSTPKT DHMYQQEECI LVMLDIQCRV QGDIVLEFVN LSDNLVCEEM IFRIMFHTAF VRGNVLKIRR TMMDILWDTK DEFPKELEAE LRFSDAVVPA
301: MSTAPPLCPL MPLGVPPPPP PPPFRYGGPP TSTLPPMGTP SPAMHGVAPP PPPPPPPFRY GGLSPPLRPP MGAPPRPMCG GVPPPPPPPP LRSNRRGVPP
401: APPPPPPFIY GKPQTPTPPP TGTPSPPMRG GSPRPPPFRY GGHPPPLWQP MGTPSSSIRR GAPPPPPLPP MRGGRGRPGL GSSSKRRSSV RPIPLPWAFN
501: KTLREEFQRY GGQTPILRVY GQDPDAGPNR SSMLLFSTPK TNTHTRLYQQ EECTLVKLDI QCRVQGDVVL ECIHLHDDLV REEMVFRIMF HTAFVHGNAL
601: IVQRDEMDIL WDAEDQFPKE FKAEVLFSGS DLVVPTIATS SMSDDKDSFV VPDDSEATSV LHSSQAAESP PPLAYYSLGH LQTSQISSPP FSYVMGNSRT
701: MLPPPSLPPP PPPLYFSSLN TTKAKRSASR KAHPPHQMHG PPSPPPPPPT RGLAPIPPVC EPFVGPPPPP PSILGGTGAA VDPKGSGLLR PMYGAPTPPP
801: PPPMRGR

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.