Factsheet for Zm00001d017027_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G190700.1	Wheat	cytosol	71.55	48.17
TraesCS2B01G209500.1	Wheat	cytosol	71.13	47.89
TraesCS2A01G182900.1	Wheat	cytosol, golgi, nucleus	70.71	47.61
Solyc06g069660.1.1	Tomato	mitochondrion	50.63	35.59
HORVU2Hr1G034470.10	Barley	cytosol	74.06	15.26
CDX69992	Canola	cytosol	48.12	15.19
Zm00001d045102_P001	Maize	cytosol	41.0	15.15
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	54.39	13.96
Zm00001d032101_P001	Maize	cytosol	38.08	13.36
Zm00001d006758_P003	Maize	cytosol	85.36	12.58
Bra009307.1-P	Field mustard	cytosol	39.33	11.65
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	82.01	11.54
CDX99027	Canola	nucleus	38.08	10.54
AT3G32420.1	Thale cress	cytosol	4.6	10.28
Zm00001d050024_P001	Maize	cytosol	51.88	8.95
Zm00001d018371_P001	Maize	cytosol	47.7	8.06
Zm00001d041515_P003	Maize	mitochondrion	50.21	5.61
Zm00001d030782_P001	Maize	mitochondrion	46.03	5.38
Zm00001d030781_P001	Maize	cytosol	2.09	4.67
TraesCS2B01G209600.1	Wheat	cytosol	4.18	2.45
TraesCS2A01G183000.1	Wheat	cytosol	4.18	2.45
TraesCS2D01G190800.1	Wheat	cytosol	4.18	2.45
Zm00001d021173_P001	Maize	plasma membrane	7.53	2.36
Zm00001d030780_P001	Maize	cytosol	1.67	2.25
Zm00001d032225_P001	Maize	golgi	8.37	2.24
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	7.53	2.14
Zm00001d015326_P003	Maize	mitochondrion, plastid	8.37	1.98
Zm00001d021985_P001	Maize	plasma membrane	6.28	1.89
Zm00001d048142_P001	Maize	plasma membrane	6.69	1.86
Zm00001d013926_P001	Maize	extracellular, plasma membrane	6.28	1.8
Zm00001d032545_P001	Maize	plasma membrane	6.28	1.75
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	6.69	1.74
Zm00001d028089_P001	Maize	plasma membrane	6.28	1.7
Zm00001d042506_P002	Maize	extracellular, plasma membrane	6.69	1.67
Zm00001d012158_P001	Maize	extracellular, plasma membrane	6.28	1.58
Zm00001d003406_P002	Maize	plasma membrane	5.44	1.55
Zm00001d017983_P001	Maize	plasma membrane	5.86	1.52
Zm00001d024947_P005	Maize	plasma membrane	6.28	1.5
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	5.44	1.37
Solyc06g069670.2.1	Tomato	nucleus	4.6	1.19
Zm00001d035757_P003	Maize	plasma membrane	5.44	0.77

Protein Annotations

EnsemblPlants:Zm00001d017027_P001	EnsemblPlants:Zm00001d017027_T001	EnsemblPlantsGene:Zm00001d017027	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	InterPro:IPR014020
InterPro:IPR029021	InterPro:Prot-tyrosine_phosphatase-like	InterPro:Tensin_C2-dom	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	PFscan:PS51182
ProteinID:AQK72149.1	SUPFAM:SSF52799	UniParc:UPI000221BBF5	UniProt:A0A1D6HBS1	MapMan:35.1	:

Description

Formin-like protein 18

Coordinates

chr5:+:183110798..183112253

Molecular Weight (calculated)

28248.2 Da

IEP (calculated)

9.403

GRAVY (calculated)

-0.498

Length

239 amino acids

Sequence
(BLAST)

001: MASNFWSRDK RSRISDILSE YDMTVMDYPQ QYEGCPLLQL EMIHHFLKSC ENWLSVEGQH NMLLMHSERG SWPVLAFMLA RLLLYRKIYI GEQRTLEMVY
101: KQARREFIQQ FFPLNPQPSH LRYLHYITRQ RGGSEWPPIS RPFILDSIVL HVVPRFDADG GCRPYLIVHG QDSSPGNKSA KVLYEMPNAK KHLQRYGQKS
201: NLLSPRFWLV FHEIFKIKNH AIKYLEDHRS SPDPNETLG

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.