Factsheet for Zm00001d013926_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032545_P001	Maize	plasma membrane	87.43	84.98
KXG38231	Sorghum	plastid	91.62	84.81
GSMUA_Achr7P26240_001	Banana	cytosol	28.26	71.3
HORVU1Hr1G077850.2	Barley	mitochondrion	52.34	61.12
Zm00001d028089_P001	Maize	plasma membrane	63.11	59.75
GSMUA_Achr4P07090_001	Banana	cytosol	32.69	59.35
TraesCS1A01G327400.1	Wheat	plasma membrane	56.89	59.08
Os10t0347800-00	Rice	cytosol, nucleus, plastid	60.48	59.06
Zm00001d048142_P001	Maize	plasma membrane	60.0	58.19
TraesCS1B01G340800.1	Wheat	mitochondrion	57.25	57.31
TraesCS1D01G329400.1	Wheat	plastid	56.89	56.95
CDY37849	Canola	endoplasmic reticulum	33.53	53.33
CDY08720	Canola	mitochondrion	40.36	46.35
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	47.54	44.81
CDY43578	Canola	endoplasmic reticulum, extracellular	43.23	42.98
PGSC0003DMT400055250	Potato	vacuole	44.79	42.21
Solyc02g092470.2.1	Tomato	nucleus	44.91	42.18
KRH28364	Soybean	vacuole	44.91	41.9
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	44.31	41.62
KRH04437	Soybean	plastid, vacuole	43.95	41.52
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	44.67	41.49
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	43.83	41.17
CDY36494	Canola	endoplasmic reticulum, vacuole	44.19	40.91
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	43.71	40.69
PGSC0003DMT400038519	Potato	endoplasmic reticulum	42.4	40.18
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	41.56	40.02
Zm00001d021985_P001	Maize	plasma membrane	37.37	39.34
Zm00001d021173_P001	Maize	plasma membrane	34.85	38.19
Bra031838.1-P	Field mustard	cytosol	19.88	37.73
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	36.77	36.46
Zm00001d042506_P002	Maize	extracellular, plasma membrane	40.0	34.94
Zm00001d012158_P001	Maize	extracellular, plasma membrane	39.4	34.6
Zm00001d030781_P001	Maize	cytosol	4.19	32.71
Zm00001d003406_P002	Maize	plasma membrane	28.98	28.78
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	27.66	25.05
Zm00001d017983_P001	Maize	plasma membrane	27.43	24.86
Zm00001d032225_P001	Maize	golgi	26.47	24.78
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	25.27	22.3
Zm00001d024947_P005	Maize	plasma membrane	25.63	21.34
Zm00001d015326_P003	Maize	mitochondrion, plastid	25.03	20.65
Zm00001d030780_P001	Maize	cytosol	2.75	12.92
Zm00001d035757_P003	Maize	plasma membrane	23.95	11.88
Zm00001d050024_P001	Maize	cytosol	17.37	10.46
Zm00001d018371_P001	Maize	cytosol	16.05	9.48
Zm00001d006758_P003	Maize	cytosol	16.29	8.39
Zm00001d032101_P001	Maize	cytosol	6.59	8.08
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	16.41	8.06
Zm00001d041515_P003	Maize	mitochondrion	16.77	6.54
Zm00001d017027_P001	Maize	cytosol	1.8	6.28
Zm00001d030782_P001	Maize	mitochondrion	13.53	5.53
Zm00001d045102_P001	Maize	cytosol	3.47	4.48

Protein Annotations

EnsemblPlants:Zm00001d013926_P001	EnsemblPlants:Zm00001d013926_T001	EnsemblPlantsGene:Zm00001d013926	Gene3D:1.20.58.2220	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF261
PFAM:PF02181	PFscan:PS51444	ProteinID:AQK64822.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498
SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI0008444F76	UniProt:A0A1D6GNM9	MapMan:20.2.2.6.1	:

Description

Formin-like protein 6

Coordinates

chr5:+:24983948..24987816

Molecular Weight (calculated)

89510.7 Da

IEP (calculated)

8.857

GRAVY (calculated)

-0.343

Length

835 amino acids

Sequence
(BLAST)

001: MSPVLWLTSL LFLVHSAAAD TRRALHEPLF PIEWTPPPST TAPPAPGFAS DPSTPVPPVD NGGPALLPAP PPPNTVAADA SSSRTGPGPR PHGGGGTPKA
101: AIVVASAAAA AVLALLAFAA AFLLTGRLAR HPAWAHKPPG LAAAAHPGPA SALVLHADAV GTSAAAAASS SGATATPHRK ARSERARRGM CRDVDTVPSP
201: ELRPLPPLRR AGSSDEDAAY YTPGQRSAVS AGGEGAGTWS QASASSPRTT TPSRQSLPSL TSDFFPPTPA AATAVPAATV APPPPAPPAP RSRRTLPRTR
301: FSAGSASDMN MIKQIVSPSS NLPPPPPPPP PPPPPAPRRT NAIPKPLTTA TPLSTRRLLK QEQTEGPSVA VPRAPVVAVN KDNDGMPIRT NDDHAGDEAR
401: PKLKPLHWDK VRACSDRDMV WDRLKLDEDM IEVLFTNNAA NAPPRDTLRK PGVLQCSAKE KVLDPKKAQN IAILLRALNV TPEEVSDALL DGNAECLGAD
501: LLETLVKMAP TKEEELKLRN FTGDSSKLGS AERFLKAVLD IPFSFKRVDA MLYRANFESE INYLRKSFET LEGACDDLKS SRLFLKLLEA VLRTGNRMNV
601: GTNRGQAKAF KLDTLLKLAD VKGADGKTTL LHFVVQEIVR SEDAKSEKAV EDETRSIVKD ETFRKQGLKV VSGLSNELGN VKKAAGMDFD VLHSYVSKLQ
701: AGLSRIKSVL LLEEQCAQGH GFFARMRGFL EEAEMEIQQV RCDEERALGR VKEITEYFHG DAGKEEAHPL RIFMVVRDFL SMLDHVCKEV GQQDRTVVVG
801: SARSFRMSAT TAMANLKVYG QHARDNDDDE ESWSL

Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)

001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST

Arabidopsis Description

FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.