Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055250 | Potato | vacuole | 96.4 | 96.73 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 25.87 | 69.49 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 65.47 | 65.69 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 62.43 | 64.01 |
| CDY37849 | Canola | endoplasmic reticulum | 37.57 | 63.62 |
| KRH28364 | Soybean | vacuole | 61.19 | 60.78 |
| CDY08720 | Canola | mitochondrion | 49.61 | 60.66 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 60.52 | 60.52 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 30.6 | 59.13 |
| KRH04437 | Soybean | plastid, vacuole | 58.72 | 59.05 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 55.68 | 58.93 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 57.82 | 57.82 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 58.27 | 57.62 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 58.04 | 57.21 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 57.26 | 56.74 |
| HORVU4Hr1G069940.1 | Barley | plastid | 36.56 | 56.13 |
| Os03t0204100-01 | Rice | plasma membrane | 47.36 | 47.2 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 46.68 | 46.84 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 46.79 | 46.74 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 46.91 | 46.49 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 46.68 | 46.47 |
| Zm00001d028089_P001 | Maize | plasma membrane | 46.01 | 46.37 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 42.18 | 44.91 |
| Zm00001d048142_P001 | Maize | plasma membrane | 43.42 | 44.83 |
| KXG39923 | Sorghum | mitochondrion | 47.24 | 44.63 |
| Bra031838.1-P | Field mustard | cytosol | 21.93 | 44.32 |
| Zm00001d032545_P001 | Maize | plasma membrane | 42.29 | 43.77 |
| HORVU1Hr1G077850.2 | Barley | mitochondrion | 34.87 | 43.36 |
| KXG38231 | Sorghum | plastid | 43.42 | 42.79 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 38.7 | 42.79 |
| Os07t0588200-01 | Rice | golgi, plasma membrane, vacuole | 37.12 | 42.64 |
| Solyc08g014430.2.1 | Tomato | nucleus | 36.0 | 42.27 |
| Os10t0347800-00 | Rice | cytosol, nucleus, plastid | 40.05 | 41.64 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 39.03 | 41.61 |
| Solyc12g019480.1.1 | Tomato | nucleus | 41.17 | 41.22 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 36.0 | 40.87 |
| HORVU2Hr1G035230.1 | Barley | golgi, plasma membrane, plastid | 36.11 | 40.79 |
| Zm00001d021985_P001 | Maize | plasma membrane | 36.33 | 40.73 |
| EER97466 | Sorghum | plasma membrane | 36.22 | 40.55 |
| TraesCS2A01G193700.1 | Wheat | golgi | 35.77 | 40.51 |
| TraesCS1D01G329400.1 | Wheat | plastid | 37.68 | 40.17 |
| Solyc06g082910.2.1 | Tomato | extracellular | 40.72 | 38.68 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 39.26 | 38.39 |
| Solyc01g099650.2.1 | Tomato | nucleus | 33.3 | 32.78 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 26.21 | 29.68 |
| Solyc10g006540.2.1 | Tomato | extracellular | 29.36 | 27.97 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 28.8 | 27.89 |
| Solyc07g064010.2.1 | Tomato | golgi | 27.67 | 27.67 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 22.83 | 27.1 |
| Solyc07g052730.2.1 | Tomato | golgi | 28.68 | 26.7 |
| Solyc03g115680.2.1 | Tomato | plastid | 12.49 | 21.35 |
| Solyc08g075650.2.1 | Tomato | cytosol | 9.67 | 21.18 |
| Solyc07g005480.2.1 | Tomato | vacuole | 15.64 | 15.72 |
| Solyc06g069670.2.1 | Tomato | nucleus | 13.16 | 12.66 |
| Solyc12g010110.1.1 | Tomato | cytosol | 17.32 | 11.86 |
| Solyc07g005500.2.1 | Tomato | cytosol | 5.85 | 9.4 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 4.39 | 8.44 |
| Solyc08g075670.1.1 | Tomato | cytosol | 4.5 | 8.0 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 2.59 | 6.76 |
Protein Annotations
| EnsemblPlants:Solyc02g092470.2.1 | EnsemblPlantsGene:Solyc02g092470.2 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | PFAM:PF02181 |
| PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix |
| UniParc:UPI0002767F58 | UniProt:K4BD43 | MapMan:20.2.2.6.1 | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4BD43]
Coordinates
chr2:-:53513739..53518734
Molecular Weight (calculated)
98480.2 Da
IEP (calculated)
9.384
GRAVY (calculated)
-0.600
Length
889 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAAGLSIFF ILSLLSSFTC QFQDLVVKEK NRRILHQPLF PVSSTPPPDS EISPPPPAEP VNSQPFFPEV PTGTTPDQTH QPQVTPANGT PVSNSVATQT
101: AKPVKKVAIA ISVGIVTLGM LSALAFYLYK HRVKHPDETQ KLVRRNSDQR INEESRTPPS TFLYIGTVEP PAKTSAMTDS NDATGSPYRK LSSVKRMDSR
201: YRPSPDLQPL PPLSKPQPPP SINSPTAMSS SDEESHDTAF HTPQGSTVSN EEGYYTPSLR ESYSSNKNYV PYSKRTSPRS RLSDSSAEVK HTMIPSIKQA
301: PVPPLPPRQP QGGLIEQLPP EPPLQYTRPE LYVPKRANFS SPPPPPDMTR LQLISNQAQQ ISKAPPPPPP PPPLPPPPPP LPFSTPHKPE GSQRNVPSAA
401: YQQMVKTESR SPTPKSTPGS EKTSTSEEQN GGASSLERHD SSDIDPSKPK LKPLHWDKVR ATSDRATVWD QLKSSSFQLN EDMMESLFGC NSANSVPKEA
501: TRKSVLPPAE KDNKVLDPKK SQNIAIILRA LNVTKDEVSE ALLNGNPEGL GPELLETLVK MAPTKEEEIK LREYSEDASK LGSAERFLKT VLDIPFAFKR
601: VEIMLYRANF DGEVKDLRKS FQTLEVASEE LKNSRLFLKL LEAVLRTGNR MNVGTNRGDA RAFKLDTLLK LVDIKGTDGK TTLLHFVVQE IIRSEELDSE
701: PPGEDLSNKA NIKFKEEDFK KQGLQVVSGL SRELGNVKKA AAMDSDVLGS YVLKLAVGLD KARSVLQYEK QGMQGNFFES MKVFLKEAED GIVRIRAEER
801: KALSMVKQVT EYFHGDAAKE EAHPLRIFVI VRDFLSILDN VCKDVRRMQD QTVVGGARSF RIVATASLPV LSRYNVKQER SWDDNSLSP
101: AKPVKKVAIA ISVGIVTLGM LSALAFYLYK HRVKHPDETQ KLVRRNSDQR INEESRTPPS TFLYIGTVEP PAKTSAMTDS NDATGSPYRK LSSVKRMDSR
201: YRPSPDLQPL PPLSKPQPPP SINSPTAMSS SDEESHDTAF HTPQGSTVSN EEGYYTPSLR ESYSSNKNYV PYSKRTSPRS RLSDSSAEVK HTMIPSIKQA
301: PVPPLPPRQP QGGLIEQLPP EPPLQYTRPE LYVPKRANFS SPPPPPDMTR LQLISNQAQQ ISKAPPPPPP PPPLPPPPPP LPFSTPHKPE GSQRNVPSAA
401: YQQMVKTESR SPTPKSTPGS EKTSTSEEQN GGASSLERHD SSDIDPSKPK LKPLHWDKVR ATSDRATVWD QLKSSSFQLN EDMMESLFGC NSANSVPKEA
501: TRKSVLPPAE KDNKVLDPKK SQNIAIILRA LNVTKDEVSE ALLNGNPEGL GPELLETLVK MAPTKEEEIK LREYSEDASK LGSAERFLKT VLDIPFAFKR
601: VEIMLYRANF DGEVKDLRKS FQTLEVASEE LKNSRLFLKL LEAVLRTGNR MNVGTNRGDA RAFKLDTLLK LVDIKGTDGK TTLLHFVVQE IIRSEELDSE
701: PPGEDLSNKA NIKFKEEDFK KQGLQVVSGL SRELGNVKKA AAMDSDVLGS YVLKLAVGLD KARSVLQYEK QGMQGNFFES MKVFLKEAED GIVRIRAEER
801: KALSMVKQVT EYFHGDAAKE EAHPLRIFVI VRDFLSILDN VCKDVRRMQD QTVVGGARSF RIVATASLPV LSRYNVKQER SWDDNSLSP
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.