Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- mitochondrion 2
- cytosol 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029052 | Potato | cytosol | 31.11 | 99.64 |
| Solyc08g075650.2.1 | Tomato | cytosol | 27.94 | 60.84 |
| Solyc03g115680.2.1 | Tomato | plastid | 32.47 | 55.19 |
| Os08t0280200-02 | Rice | nucleus | 39.82 | 39.42 |
| Solyc12g010110.1.1 | Tomato | cytosol | 54.52 | 37.11 |
| KRH72294 | Soybean | cytosol | 45.7 | 33.42 |
| KRH03063 | Soybean | cytosol | 44.68 | 32.7 |
| VIT_11s0016g00160.t01 | Wine grape | cytosol | 42.19 | 32.32 |
| Solyc06g069670.2.1 | Tomato | nucleus | 32.81 | 31.39 |
| Bra002668.1-P | Field mustard | cytosol | 42.99 | 29.41 |
| CDY62689 | Canola | cytosol | 42.99 | 29.41 |
| CDY02799 | Canola | cytosol | 41.52 | 29.34 |
| AT5G58160.1 | Thale cress | cytosol | 41.97 | 29.3 |
| CDY32721 | Canola | cytosol | 41.18 | 29.26 |
| CDY43877 | Canola | cytosol | 40.27 | 27.01 |
| Bra020385.1-P | Field mustard | cytosol | 42.19 | 26.72 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 41.29 | 26.3 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 41.29 | 26.05 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 41.18 | 25.94 |
| Os02t0794900-00 | Rice | cytosol | 39.48 | 25.31 |
| TraesCS6D01G339300.1 | Wheat | cytosol | 37.9 | 25.09 |
| HORVU5Hr1G123610.1 | Barley | cytosol, plastid | 1.13 | 25.0 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 37.67 | 24.93 |
| KXG31267 | Sorghum | cytosol | 39.14 | 23.21 |
| OQU80260 | Sorghum | cytosol | 25.57 | 19.93 |
| Solyc08g014430.2.1 | Tomato | nucleus | 14.48 | 16.91 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 13.57 | 16.02 |
| Solyc02g092470.2.1 | Tomato | nucleus | 15.72 | 15.64 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 14.82 | 15.11 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 15.5 | 15.07 |
| Solyc07g064010.2.1 | Tomato | golgi | 14.82 | 14.74 |
| Solyc06g082910.2.1 | Tomato | extracellular | 15.16 | 14.32 |
| Solyc01g099650.2.1 | Tomato | nucleus | 14.48 | 14.18 |
| Solyc12g019480.1.1 | Tomato | nucleus | 14.14 | 14.08 |
| Solyc10g006540.2.1 | Tomato | extracellular | 14.71 | 13.93 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 12.33 | 13.89 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 12.9 | 12.42 |
| Solyc07g052730.2.1 | Tomato | golgi | 13.24 | 12.25 |
| Zm00001d032101_P001 | Maize | cytosol | 8.26 | 10.72 |
| Solyc07g005500.2.1 | Tomato | cytosol | 6.11 | 9.76 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 2.49 | 4.76 |
| Solyc08g075670.1.1 | Tomato | cytosol | 2.38 | 4.2 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 1.13 | 2.94 |
| GSMUA_Achr1P25980_001 | Banana | plasma membrane | 0.79 | 2.47 |
Protein Annotations
| EnsemblPlants:Solyc07g005480.2.1 | EnsemblPlantsGene:Solyc07g005480.2 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF190 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00498 | SUPFAM:SSF101447 | UniParc:UPI000276BFAF | UniProt:K4CB20 | MapMan:20.2.2.6.2 | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4CB20]
Coordinates
chr7:-:383451..394960
Molecular Weight (calculated)
95360.0 Da
IEP (calculated)
9.706
GRAVY (calculated)
-0.533
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLLRLNLY LMHLLLLHPK PKDEKPTLSQ PDTYLLPLAA QKPDHKGEPA SSPHLTGLSL SPSPLVPSPH TPPVKDKLVT GTIPSASQAT PPRTQCSPIV
101: SLKDDRPAMS QSDAPLLPRT LQQPAYEGES TSPPRTAQQL GDEAAKKEPT RPLHPSKSCP PSLAPPNSSS PSAAIPFIKP IEQQFVQSSN FSPPPPPPPS
201: QHPIPLLNEN AGSVGGSPQS PAPPTPPLKE HSVFRGVPSL PPPPLPPPPP RDSYPLSTPP VLSKNSVCTS EPLGPVPTLK ESSAFRDKSP PLPPPPPPPP
301: CQLNTTQILS PNSASISEPP PPPPPPTPPL KEKVVPLTRE PPPPPLPPPL PVQSMKENSS FNGGPAPPPP PPLPASQASK PANVSVMPPP PPPPALGSRQ
401: SVPSAPPPPA LGSRQTVPSA PPPPVPSLKP DLKAGSGMIQ SASKGSNLPT SPSPPPPSAP PPGLKGRGPL SRTMNSRSQS SKKLKPLHWL KISRAVSGSL
501: WAEAQKCSDA PKAPEIDISE LESLFSAAVP TSGQGSSGGK RNSGTSMGQK LEKVQLVDHR RAYNCEIMLS KVKIPLHEML SSVLALEDSA LDVDQVENLI
601: KFCPTKEEME TLKGYKGEKE KLGRCEQFML ELMQVPRTES KLRVFSFKIQ FESQVSELRK SLNIVNSAAD QIKGSSKLKR IMQTILSLGN ALNQGTARGS
701: AVGFRLDSLL KLTETRARNN KMTLMHYLCK VLADKLPELL DFSNDLSSLE PCAKIQLKFL AEEMQAISKG LEKVVQELSM SENDGAVSEN FRKALKEFLC
801: YAEGEVRSLA QLYSGVGRNV DTLILYFGED PARCPFEQVI TTLLNFRRMF NQALEENRKQ VEFERKKAEK EAMEKQKMSH SEKT
101: SLKDDRPAMS QSDAPLLPRT LQQPAYEGES TSPPRTAQQL GDEAAKKEPT RPLHPSKSCP PSLAPPNSSS PSAAIPFIKP IEQQFVQSSN FSPPPPPPPS
201: QHPIPLLNEN AGSVGGSPQS PAPPTPPLKE HSVFRGVPSL PPPPLPPPPP RDSYPLSTPP VLSKNSVCTS EPLGPVPTLK ESSAFRDKSP PLPPPPPPPP
301: CQLNTTQILS PNSASISEPP PPPPPPTPPL KEKVVPLTRE PPPPPLPPPL PVQSMKENSS FNGGPAPPPP PPLPASQASK PANVSVMPPP PPPPALGSRQ
401: SVPSAPPPPA LGSRQTVPSA PPPPVPSLKP DLKAGSGMIQ SASKGSNLPT SPSPPPPSAP PPGLKGRGPL SRTMNSRSQS SKKLKPLHWL KISRAVSGSL
501: WAEAQKCSDA PKAPEIDISE LESLFSAAVP TSGQGSSGGK RNSGTSMGQK LEKVQLVDHR RAYNCEIMLS KVKIPLHEML SSVLALEDSA LDVDQVENLI
601: KFCPTKEEME TLKGYKGEKE KLGRCEQFML ELMQVPRTES KLRVFSFKIQ FESQVSELRK SLNIVNSAAD QIKGSSKLKR IMQTILSLGN ALNQGTARGS
701: AVGFRLDSLL KLTETRARNN KMTLMHYLCK VLADKLPELL DFSNDLSSLE PCAKIQLKFL AEEMQAISKG LEKVVQELSM SENDGAVSEN FRKALKEFLC
801: YAEGEVRSLA QLYSGVGRNV DTLILYFGED PARCPFEQVI TTLLNFRRMF NQALEENRKQ VEFERKKAEK EAMEKQKMSH SEKT
0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
Arabidopsis Description
FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.