Factsheet for Solyc03g113710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063186	Potato	plastid	95.46	94.7
KRH63456	Soybean	cytosol	44.73	51.3
GSMUA_Achr6P04430_001	Banana	cytosol	28.84	50.82
KRH54463	Soybean	endoplasmic reticulum, golgi	48.73	50.48
VIT_17s0000g07570.t01	Wine grape	nucleus	54.87	48.41
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	44.86	42.8
GSMUA_Achr8P22610_001	Banana	plasma membrane	37.38	36.94
EES05554	Sorghum	plasma membrane	39.92	32.5
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	38.45	31.96
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	38.45	31.96
Zm00001d017983_P001	Maize	plasma membrane	38.99	31.7
TraesCS6A01G312000.2	Wheat	plastid	38.18	31.53
KXG39193	Sorghum	plastid	35.38	31.1
HORVU6Hr1G076870.4	Barley	plastid	37.78	30.2
Solyc08g014430.2.1	Tomato	nucleus	25.23	24.97
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	27.24	23.53
Solyc02g092470.2.1	Tomato	nucleus	27.1	22.83
Solyc01g099650.2.1	Tomato	nucleus	27.24	22.59
Solyc12g019480.1.1	Tomato	nucleus	26.57	22.41
Solyc06g082910.2.1	Tomato	extracellular	27.77	22.22
Solyc05g046120.2.1	Tomato	plasma membrane	27.24	22.22
Solyc10g006540.2.1	Tomato	extracellular	27.64	22.19
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	26.84	22.11
Solyc07g064010.2.1	Tomato	golgi	25.23	21.26
Solyc07g052730.2.1	Tomato	golgi	26.44	20.73
Solyc08g075650.2.1	Tomato	cytosol	10.95	20.2
Solyc03g115680.2.1	Tomato	plastid	13.48	19.42
Solyc07g005480.2.1	Tomato	vacuole	16.02	13.57
Solyc06g069670.2.1	Tomato	nucleus	14.95	12.12
Solyc12g010110.1.1	Tomato	cytosol	16.42	9.47
Solyc07g005500.2.1	Tomato	cytosol	5.34	7.23
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	2.8	4.55
Solyc06g069660.1.1	Tomato	mitochondrion	1.47	3.24
Solyc08g075670.1.1	Tomato	cytosol	1.87	2.8

Protein Annotations

EnsemblPlants:Solyc03g113710.2.1	EnsemblPlantsGene:Solyc03g113710.2	Gene3D:1.20.58.2220	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF273	PFAM:PF02181
PFscan:PS51444	SEG:seg	SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI0002767E01
UniProt:K4BKM3	MapMan:20.2.2.6.1	:	:	:	:

Description

Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4BKM3]

Coordinates

chr3:-:63777424..63780049

Molecular Weight (calculated)

83760.0 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.563

Length

749 amino acids

Sequence
(BLAST)

001: MDIPGPPPTN SSQKHVVLKA VIAAVLSTLV VAGILFYFFY RYYVIRRWKK NKLNSSFRRE VPHQEFQQTG ALKGLIVDEN GLDVIYLRRF EGSQLGSCFS
101: KIWVNHMDED EDGEEEKRID SRREQPVSSD HIQEMPLLQN CSNVGSYENK EAVTASQQRT NSLFAASRSS KQPSTSLLFQ QKEIIPPQPE TPSELAVVSS
201: QNPPQPPIHP PAPPPPPPQP PAPAPPPPPL PMKRIAKAPT PPNAGKIKSS PPFPPPKGDG LSSLIKPPIA PRGNGSRKDK AEAQNKEKSK ENGETKVKLR
301: PLHWDKVVAN ADHSMVWDEI NNGSFRFEDD LMEALFGYNV TSKRTPEGNR ATTSSGTSKL ARPTQMFILD PRKSQNTAIV LKSLSVSRKE ILDALMEGQG
401: LSVDTLEKLT KICPTEEETS KILQFDGNTR KLADAESFLY QMLKAVPSAF KRFNAMLFRS NYDPEILNLK ENLQTIELGC KELRTSRIFI RLLEAILKAG
501: NRMNAGTARG NAQGFNLSAL QKLSYVKSND GKTTLLHFVV EQVICSEGKR CLINKGHKDD SDRKTEKVEK DTEHLTLGLP VLQGLSSEFS NVKKAATIDY
601: DSFINTCSTL TTRVNDVKHL ITCCGIAERD QFVKETKGFL EECEEELKLI REEQTRVMEL VKRTTEYYQA GTSKEKSTQS LQLFAFVKDF LDMVDKVCVD
701: ITKKVQKKSA ATVESSPPRS PRPITPVRSH NLITYFTPEI ASSESENDF

Best Arabidopsis Sequence Match ( AT1G59910.1 )
(BLAST)

001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES

Arabidopsis Description

FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.