Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400020452 | Potato | cytosol | 12.16 | 95.76 |
| Solyc07g005500.2.1 | Tomato | cytosol | 27.17 | 63.83 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 16.01 | 61.18 |
| GSMUA_Achr1P25980_001 | Banana | plasma membrane | 12.86 | 59.01 |
| Solyc08g075650.2.1 | Tomato | cytosol | 17.55 | 56.16 |
| Solyc07g005480.2.1 | Tomato | vacuole | 37.11 | 54.52 |
| VIT_11s0016g00160.t01 | Wine grape | cytosol | 47.19 | 53.12 |
| KRH72294 | Soybean | cytosol | 48.34 | 51.94 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 18.32 | 51.52 |
| KRH03063 | Soybean | cytosol | 47.73 | 51.32 |
| Solyc03g115680.2.1 | Tomato | plastid | 20.17 | 50.38 |
| AT5G58160.1 | Thale cress | cytosol | 45.11 | 46.29 |
| CDY02799 | Canola | cytosol | 44.5 | 46.2 |
| CDY32721 | Canola | cytosol | 44.03 | 45.98 |
| Bra002668.1-P | Field mustard | cytosol | 45.57 | 45.82 |
| CDY62689 | Canola | cytosol | 45.57 | 45.82 |
| CDY43877 | Canola | cytosol | 44.11 | 43.48 |
| Solyc08g075670.1.1 | Tomato | cytosol | 16.63 | 43.2 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 44.5 | 41.64 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 44.65 | 41.4 |
| Bra020385.1-P | Field mustard | cytosol | 44.42 | 41.33 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 44.26 | 40.98 |
| OQU80260 | Sorghum | cytosol | 34.87 | 39.95 |
| Os08t0280200-02 | Rice | nucleus | 25.33 | 36.84 |
| Os02t0794900-00 | Rice | cytosol | 39.11 | 36.84 |
| KXG31267 | Sorghum | cytosol | 41.57 | 36.22 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 37.18 | 36.15 |
| TraesCS6D01G339300.1 | Wheat | cytosol | 37.03 | 36.03 |
| Zm00001d032101_P001 | Maize | cytosol | 18.71 | 35.68 |
| Solyc06g069670.2.1 | Tomato | nucleus | 20.48 | 28.79 |
| HORVU5Hr1G123610.1 | Barley | cytosol, plastid | 0.85 | 27.5 |
| Solyc08g014430.2.1 | Tomato | nucleus | 10.85 | 18.63 |
| Solyc02g092470.2.1 | Tomato | nucleus | 11.86 | 17.32 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 11.32 | 16.95 |
| Solyc06g082910.2.1 | Tomato | extracellular | 11.93 | 16.56 |
| Solyc07g064010.2.1 | Tomato | golgi | 11.32 | 16.54 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 11.55 | 16.5 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 9.93 | 16.43 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 9.47 | 16.42 |
| Solyc01g099650.2.1 | Tomato | nucleus | 11.39 | 16.39 |
| Solyc12g019480.1.1 | Tomato | nucleus | 11.16 | 16.33 |
| Solyc10g006540.2.1 | Tomato | extracellular | 11.47 | 15.97 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 10.47 | 14.81 |
| Solyc07g052730.2.1 | Tomato | golgi | 10.62 | 14.45 |
Protein Annotations
| Gene3D:1.20.58.2220 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | ncoils:Coil | InterPro:FH2_Formin |
| InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 | InterPro:IPR029023 | UniProt:K4DC98 | PFAM:PF02181 |
| PFAM:PF10409 | PFscan:PS51181 | PFscan:PS51182 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF190 |
| InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00498 | SMART:SM01326 | SUPFAM:SSF101447 | SUPFAM:SSF49562 | SUPFAM:SSF52799 |
| EnsemblPlantsGene:Solyc12g010110.1 | EnsemblPlants:Solyc12g010110.1.1 | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | UniParc:UPI0002769CD2 | SEG:seg |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4DC98]
Coordinates
chr12:+:3235748..3245807
Molecular Weight (calculated)
144320.0 Da
IEP (calculated)
6.703
GRAVY (calculated)
-0.456
Length
1299 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALFRKLFYR KPPDGLLEIG GDRVYVFDRC FSTDVWEEKN YKGYVASVIT QLRDHYPDVS ILAFNFREGE SESLIANDLS EHDVTIMDYP RHYEGCPLLS
0101: MEMINHFLRS SESWLSLGQQ NVLLLHCEWG GWPVLAFMSA ALLIYRRHSN GEQKTLDMIY KQAPHDLLQM QPLNPIPSQL RYLQYVARRN SNTQWPPLDR
0201: ALTLDCIIIR MIPNCNGKGG CRPIFRIYGQ DPFIVSDRSP KSLFSTQKKS NVVHYYKQEE CELVKIDINC HIQGDVVLEC ISLHDDREKM MFRTMFNTSF
0301: IQSNILILDR DEVDTLWDAK DQFPKDFRTE VLFSDMDVAA SVVPVDLSCF DKKDGIPEEA FAKVQEIINS TDWLNQKGDA ASKTLEQITE SNLIPEKLGS
0401: PPDTIATTKL IDQATLENPQ ERQELAALVN NTKGLAQSTL EQQVGSSSEA YRSNKQEAMF QLVETKESSA SVTSTPVSPH ESKTVEHPSL HGKERSKLKE
0501: VSSLSEIKDR PLMTNVLMSP TPPPLRTKDQ GIVTGKPLSP ALTPPALFTP LKDKLDVPSP SQPTPPRDQS TNSIYLKDDA TTVSKPDTSL LPLGMPLSPC
0601: ENDIIAKMEP SLPTFPSGSP SPSGPIPPNI KHLEEKLVSK NGTSPSPPPL PHLVPVLEEN SAYVCGTPQT PAPPTPTLKQ NLTFSGGLSP PPPPPPPSLP
0701: PPTPSSSPCL LPTTPGFTKN CSSISGPPQP PSPPTPPLNE RLVSKGGMLP TPPPPPPPPP PLPEQPVKEG FSLIEKPCPP PPPPPPLPEK HVKEDFSLTE
0801: KLCPPPPPPL PSSQTSKPTE LYAVPPSPPP PSMVSPLKDN NNLPKSVPSV PPPPVPFPKV NNMPASPSPT PPIAPPPSKN YRRMLSSTMT SRSNSTKKLK
0901: PLHWLKISRA VQGSFWAEIE KCSYASKSSV IDMPELVYFF SVQNLDQVGS GRNGNSKTKF GQKIQKVQLV DHRRAYNCEI MLSKVKIPLH DMLTSVLALE
1001: DSALDIDQVE NLIKFCPTKE EIEVLKGYKG EKEKLGRCEQ FMLELMQVPR IESKLRVFSF TIQFQSQVSE LRNNLNIVNS ATDQIRGSSK LKGVLQTILY
1101: LGNALNQGTA RGSAAGFKLD SLLKLTDTRS WSNKMTLMHY LCKILTDKLP ELLDFSKDLS SLEPALKIQL KYLAEEMQAI TKGMEKVVDE LSMSENDGPM
1201: SENFCKALTE FLSCAEGQVS SLAQLFSDVG KNVDSLIIYF GEDPARCPFE QVVSTLMSFQ RMFNQALDEN RKQLEFERKK AEKEAKEKQS TSASNHKKT
0101: MEMINHFLRS SESWLSLGQQ NVLLLHCEWG GWPVLAFMSA ALLIYRRHSN GEQKTLDMIY KQAPHDLLQM QPLNPIPSQL RYLQYVARRN SNTQWPPLDR
0201: ALTLDCIIIR MIPNCNGKGG CRPIFRIYGQ DPFIVSDRSP KSLFSTQKKS NVVHYYKQEE CELVKIDINC HIQGDVVLEC ISLHDDREKM MFRTMFNTSF
0301: IQSNILILDR DEVDTLWDAK DQFPKDFRTE VLFSDMDVAA SVVPVDLSCF DKKDGIPEEA FAKVQEIINS TDWLNQKGDA ASKTLEQITE SNLIPEKLGS
0401: PPDTIATTKL IDQATLENPQ ERQELAALVN NTKGLAQSTL EQQVGSSSEA YRSNKQEAMF QLVETKESSA SVTSTPVSPH ESKTVEHPSL HGKERSKLKE
0501: VSSLSEIKDR PLMTNVLMSP TPPPLRTKDQ GIVTGKPLSP ALTPPALFTP LKDKLDVPSP SQPTPPRDQS TNSIYLKDDA TTVSKPDTSL LPLGMPLSPC
0601: ENDIIAKMEP SLPTFPSGSP SPSGPIPPNI KHLEEKLVSK NGTSPSPPPL PHLVPVLEEN SAYVCGTPQT PAPPTPTLKQ NLTFSGGLSP PPPPPPPSLP
0701: PPTPSSSPCL LPTTPGFTKN CSSISGPPQP PSPPTPPLNE RLVSKGGMLP TPPPPPPPPP PLPEQPVKEG FSLIEKPCPP PPPPPPLPEK HVKEDFSLTE
0801: KLCPPPPPPL PSSQTSKPTE LYAVPPSPPP PSMVSPLKDN NNLPKSVPSV PPPPVPFPKV NNMPASPSPT PPIAPPPSKN YRRMLSSTMT SRSNSTKKLK
0901: PLHWLKISRA VQGSFWAEIE KCSYASKSSV IDMPELVYFF SVQNLDQVGS GRNGNSKTKF GQKIQKVQLV DHRRAYNCEI MLSKVKIPLH DMLTSVLALE
1001: DSALDIDQVE NLIKFCPTKE EIEVLKGYKG EKEKLGRCEQ FMLELMQVPR IESKLRVFSF TIQFQSQVSE LRNNLNIVNS ATDQIRGSSK LKGVLQTILY
1101: LGNALNQGTA RGSAAGFKLD SLLKLTDTRS WSNKMTLMHY LCKILTDKLP ELLDFSKDLS SLEPALKIQL KYLAEEMQAI TKGMEKVVDE LSMSENDGPM
1201: SENFCKALTE FLSCAEGQVS SLAQLFSDVG KNVDSLIIYF GEDPARCPFE QVVSTLMSFQ RMFNQALDEN RKQLEFERKK AEKEAKEKQS TSASNHKKT
0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
Arabidopsis Description
FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.