Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013717 | Potato | plastid | 87.73 | 90.48 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 31.76 | 65.58 |
| Os01t0897700-01 | Rice | cytosol | 17.0 | 61.89 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 30.52 | 61.73 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 37.84 | 59.68 |
| Solyc08g014430.2.1 | Tomato | nucleus | 47.64 | 55.88 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 56.19 | 53.66 |
| KRH71295 | Soybean | vacuole | 48.31 | 48.75 |
| GSMUA_Achr10P... | Banana | plastid | 43.36 | 47.95 |
| KRH50174 | Soybean | vacuole | 48.09 | 47.66 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 44.48 | 46.86 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 35.25 | 46.65 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 37.95 | 46.61 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 47.41 | 46.31 |
| CDY44259 | Canola | plasma membrane, vacuole | 43.92 | 46.26 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 41.33 | 46.22 |
| CDY17909 | Canola | golgi, vacuole | 43.36 | 45.4 |
| Bra004786.1-P | Field mustard | mitochondrion, plasma membrane, plastid | 43.81 | 45.39 |
| Solyc06g082910.2.1 | Tomato | extracellular | 47.75 | 45.3 |
| Bra000328.1-P | Field mustard | golgi, plasma membrane, vacuole | 45.16 | 44.8 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 44.71 | 44.41 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 38.96 | 44.02 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 38.96 | 43.91 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 38.85 | 43.84 |
| TraesCS5A01G304700.1 | Wheat | golgi | 38.74 | 43.71 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 46.17 | 43.62 |
| Zm00001d021173_P001 | Maize | plasma membrane | 37.05 | 43.18 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 40.65 | 43.03 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 45.95 | 42.77 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 45.61 | 42.68 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 45.38 | 42.38 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 45.27 | 42.27 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 45.27 | 42.23 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 44.93 | 41.74 |
| Solyc02g092470.2.1 | Tomato | nucleus | 41.22 | 41.17 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 39.75 | 40.72 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 38.51 | 40.24 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 37.73 | 39.79 |
| TraesCS1D01G010200.1 | Wheat | plastid | 23.2 | 36.27 |
| TraesCS1B01G059400.1 | Wheat | plastid | 22.75 | 35.88 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 21.28 | 35.46 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 45.38 | 33.61 |
| HORVU1Hr1G002300.8 | Barley | plastid | 26.91 | 33.01 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 29.39 | 31.45 |
| Solyc01g099650.2.1 | Tomato | nucleus | 30.29 | 29.79 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 26.91 | 28.49 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 26.13 | 28.33 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 28.94 | 28.0 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 24.32 | 27.52 |
| Solyc07g052730.2.1 | Tomato | golgi | 29.5 | 27.43 |
| Solyc10g006540.2.1 | Tomato | extracellular | 28.15 | 26.8 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 22.41 | 26.57 |
| Solyc07g064010.2.1 | Tomato | golgi | 26.46 | 26.43 |
| Solyc08g075650.2.1 | Tomato | cytosol | 9.46 | 20.69 |
| Solyc03g115680.2.1 | Tomato | plastid | 12.05 | 20.58 |
| Solyc07g005480.2.1 | Tomato | vacuole | 14.08 | 14.14 |
| Zm00001d035757_P003 | Maize | plasma membrane | 26.46 | 13.96 |
| Solyc06g069670.2.1 | Tomato | nucleus | 13.06 | 12.55 |
| Solyc12g010110.1.1 | Tomato | cytosol | 16.33 | 11.16 |
| Solyc08g075670.1.1 | Tomato | cytosol | 5.41 | 9.6 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 4.62 | 8.87 |
| Solyc07g005500.2.1 | Tomato | cytosol | 5.52 | 8.86 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 2.93 | 7.65 |
Protein Annotations
| EnsemblPlants:Solyc12g019480.1.1 | EnsemblPlantsGene:Solyc12g019480.1 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | PFAM:PF02181 |
| PFscan:PS51444 | SEG:seg | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI0002769852 |
| UniProt:K4DDH4 | MapMan:20.2.2.6.1 | : | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4DDH4]
Coordinates
chr12:+:10578942..10583205
Molecular Weight (calculated)
97979.7 Da
IEP (calculated)
6.233
GRAVY (calculated)
-0.333
Length
888 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSLCIINL VVFTFFSFTT TTAGAGVYYR HRRILHQPFF PVVDSLPPSS LPSITHPPIS SPQPQPKFPF STLSPPETPL TQNPFFPVFS SPPPPPPPPP
101: IRSDSYATFP ANISSLILPQ TSSHSSAKPI SGKLIAIIIS VSVLSAAFLT SLVAYFLHYY RQGKVEEKMY YQRTDSLRLV PPNATPSDGV VIKKHLPSPP
201: PPPPAMEVQR HTPTSNSSEF LNLGALVSSR EVESPEVQPA DGVAVNFQRL GSPELLPLPP LPRQHYQQTR KNGAGYSGED DENDDEFFSP RGSSGDKGSP
301: SQTVSSSHAT PYEVPLQTQN RFLYSNSNSP SESSLLNSPS LEFNLSPKIS DSSARISESS LRNLGGFRSY VSMKVPPPPP PAPPPRFWEA PQVPKSVEAE
401: NGGPPVLVAP SMPVLGHHVN GNIKSSEAVE RRNDEIIKPK LKPLHWDKVR ATSDRAMVWD QLKSSSFQLN EEMIETLFTA NCSNSNPKDG ITRLVQPVLN
501: QENRVLDPKK SQNIAILLRA LNVTNEEVCE ALLEGNADTL GSELLESLLK MAPTKEEERK LHEFKDESPF KLGPAEKFLK AVLYIPFAFN RVEAMLYIAN
601: FDSEIEYLKR SFETLETACE ELRNSRMFLK LLEAVLKTGN RMNVGTNRGD ALAFKLDTLL KLVDIKGAEG KTTLLHFVVQ EIIRAEGSRL SGADDQNPIV
701: EKTLQDEVEF RKIGLQVVSR LSGELTNVKK AAAMDSDIIS NEVAKLAAGI AKITNVLKLN EELVSSENSR KFSESMNGFL KTAEQEIINI QAQEGVALSM
801: VKEVTVYFHG DSAKEEARPL RIFMVVRDFL SILDQVCKDV GRMTDRTIIS SGRQFPLTVD AGLPQVFPGY NVRQHDSSSE EETTPPTS
101: IRSDSYATFP ANISSLILPQ TSSHSSAKPI SGKLIAIIIS VSVLSAAFLT SLVAYFLHYY RQGKVEEKMY YQRTDSLRLV PPNATPSDGV VIKKHLPSPP
201: PPPPAMEVQR HTPTSNSSEF LNLGALVSSR EVESPEVQPA DGVAVNFQRL GSPELLPLPP LPRQHYQQTR KNGAGYSGED DENDDEFFSP RGSSGDKGSP
301: SQTVSSSHAT PYEVPLQTQN RFLYSNSNSP SESSLLNSPS LEFNLSPKIS DSSARISESS LRNLGGFRSY VSMKVPPPPP PAPPPRFWEA PQVPKSVEAE
401: NGGPPVLVAP SMPVLGHHVN GNIKSSEAVE RRNDEIIKPK LKPLHWDKVR ATSDRAMVWD QLKSSSFQLN EEMIETLFTA NCSNSNPKDG ITRLVQPVLN
501: QENRVLDPKK SQNIAILLRA LNVTNEEVCE ALLEGNADTL GSELLESLLK MAPTKEEERK LHEFKDESPF KLGPAEKFLK AVLYIPFAFN RVEAMLYIAN
601: FDSEIEYLKR SFETLETACE ELRNSRMFLK LLEAVLKTGN RMNVGTNRGD ALAFKLDTLL KLVDIKGAEG KTTLLHFVVQ EIIRAEGSRL SGADDQNPIV
701: EKTLQDEVEF RKIGLQVVSR LSGELTNVKK AAAMDSDIIS NEVAKLAAGI AKITNVLKLN EELVSSENSR KFSESMNGFL KTAEQEIINI QAQEGVALSM
801: VKEVTVYFHG DSAKEEARPL RIFMVVRDFL SILDQVCKDV GRMTDRTIIS SGRQFPLTVD AGLPQVFPGY NVRQHDSSSE EETTPPTS
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.