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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G397900.1 Wheat plasma membrane 96.74 96.94
TraesCS3B01G429900.1 Wheat plasma membrane 97.16 96.86
Os01t0897700-01 Rice cytosol 23.66 92.21
TraesCS3D01G391800.1 Wheat mitochondrion 91.38 91.28
OQU88036 Sorghum extracellular, plasma membrane 79.81 80.74
Zm00001d012158_P001 Maize extracellular, plasma membrane 77.92 77.92
Zm00001d042506_P002 Maize extracellular, plasma membrane 77.71 77.3
PGSC0003DMT400056393 Potato cytosol 31.97 63.33
GSMUA_Achr5P25760_001 Banana mitochondrion 27.87 60.36
VIT_00s0227g00200.t01 Wine grape cytosol 9.67 60.13
AT3G25493.1 Thale cress vacuole 8.62 51.25
VIT_05s0094g00920.t01 Wine grape nucleus 49.95 51.08
HORVU4Hr1G069940.1 Barley plastid 30.6 50.26
KRH47952 Soybean cytosol 40.06 49.1
Bra029655.1-P Field mustard cytosol 15.35 48.18
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 33.02 46.8
PGSC0003DMT400013717 Potato plastid 42.27 46.69
Bra012246.1-P Field mustard cytosol 9.46 45.92
KRH71295 Soybean vacuole 42.06 45.45
Solyc12g019480.1.1 Tomato nucleus 42.38 45.38
KRH50174 Soybean vacuole 42.27 44.87
Solyc06g082910.2.1 Tomato extracellular 44.06 44.77
Solyc09g042740.2.1 Tomato endoplasmic reticulum, vacuole 42.69 44.66
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 35.33 44.5
PGSC0003DMT400071147 Potato endoplasmic reticulum, golgi 43.74 44.07
Bra001256.1-P Field mustard plastid 17.56 43.83
Solyc08g014430.2.1 Tomato nucleus 34.81 43.73
CDX79799 Canola mitochondrion, plastid, vacuole 35.02 41.94
KRH06515 Soybean endoplasmic reticulum, plastid, vacuole 47.11 41.52
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 37.22 41.31
CDX83457 Canola golgi, plasma membrane, vacuole 36.49 41.16
AT3G25500.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 45.43 41.1
CDY17909 Canola golgi, vacuole 36.59 41.04
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 46.16 40.8
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 45.43 40.79
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 46.27 40.33
CDY44259 Canola plasma membrane, vacuole 35.65 40.21
AT2G43800.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 37.75 40.16
KRH00989 Soybean extracellular, golgi, vacuole 43.64 39.94
KRH40232 Soybean endoplasmic reticulum, extracellular 43.22 39.63
HORVU4Hr1G069930.2 Barley golgi, mitochondrion, plasma membrane 37.22 39.46
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 36.59 38.88
HORVU2Hr1G035230.1 Barley golgi, plasma membrane, plastid 32.07 38.75
HORVU1Hr1G077850.2 Barley mitochondrion 28.5 37.9
CDX85333 Canola plasma membrane 29.55 34.14
AT5G48360.1 Thale cress extracellular, vacuole 28.08 34.14
CDX86310 Canola endoplasmic reticulum, plasma membrane 28.92 34.08
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 28.81 33.95
CDY35941 Canola plastid 26.71 33.91
HORVU1Hr1G002300.8 Barley plastid 25.45 33.43
CDY28040 Canola plastid 27.02 33.38
CDX74041 Canola golgi, plasma membrane, plastid 24.82 33.1
CDY07990 Canola golgi, plasma membrane, plastid 24.29 31.99
AT3G07540.1 Thale cress plasma membrane 26.92 30.44
HORVU0Hr1G015390.6 Barley cytosol, plasma membrane, plastid 23.03 26.2
HORVU2Hr1G043830.5 Barley cytosol, nucleus, plastid 25.87 23.93
HORVU6Hr1G076870.4 Barley plastid 23.45 23.8
HORVU2Hr1G092520.9 Barley cytosol 11.25 12.65
HORVU2Hr1G006690.1 Barley peroxisome 11.04 12.03
HORVU6Hr1G085030.6 Barley plasma membrane 16.4 10.99
HORVU5Hr1G020180.51 Barley mitochondrion 17.14 8.35
HORVU1Hr1G016320.4 Barley cytosol 9.36 8.23
HORVU5Hr1G123610.1 Barley cytosol, plastid 0.21 5.0
HORVU2Hr1G034470.10 Barley cytosol 5.78 4.74
HORVU7Hr1G030310.1 Barley cytosol, plastid 2.73 4.24
HORVU0Hr1G019600.1 Barley plasma membrane 1.37 4.0
Protein Annotations
EnsemblPlants:HORVU3Hr1G089510.1EnsemblPlantsGene:HORVU3Hr1G089510Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:FH2_ForminInterPro:IPR015425ncoils:CoilPANTHER:PTHR23213PANTHER:PTHR23213:SF276PFAM:PF02181
PFscan:PS51444SEG:segSignalP:SignalP-noTMSMART:SM00498SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI000B483A63UniProt:A0A287M733MapMan:20.2.2.6.1:::
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287M733]
Coordinates
chrchr3H:+:628923468..628927818
Molecular Weight (calculated)
101259.0 Da
IEP (calculated)
9.957
GRAVY (calculated)
-0.416
Length
951 amino acids
Sequence
(BLAST)
001: MPSLRRPRRR GLLPLLIALL PILLASSSSR AVDAAPASTA RRQLHQPFVP DQSSTAPPSQ APPGPAPPFF PTLQAPPPPP GTPTAPEQPT YPALVLPNPS
101: TPAGSATAAP SDGGSGGKGS SKSSSKLVPA ILLPLLTVAV LGLSIAFFFK RRRTNAGRGV GGGCVGGGES KFLHPERASL FARDEFGGSG RGAPTTTAAS
201: TAPSAEFLYV GTLAGREDGK SSDTTSSGDE VSRSSGGSPE LRPLPPLVGR QCGPAGSRSP GIGGSSPSSG DEEFYSPRGS SKASGSQRTL AAAVQAAVAA
301: RDRSRTPSPG SAVSTPSYPS SPGATMSPAP SSPPLLSSPG QSCRRSAKAR SESARDVFGM PPTPPPPPPP FAPTLPPPPP PRRKPPSPSP PSSPLVSTPP
401: APRSATDTIS KNPFIQPPAP PTSTRGQPPP PPPPPPPPVG YWESRVRKPG ASKEAMSPAL SPPPQAANLR SVPPTDAFPG RLQDNAGHGD KSEETTPRPK
501: LKPLHWDKVR ASSDRAMVWD QLKSSSFQVN EEMIETLFIC NPANAAPKEA TKRPALPTPK AENKVLLDPK KAQNIAILLR ALNVTKEEVC EALCEGNTQN
601: FGADLLETLL KMAPTKEEEI KLREFKEETS PIKLGPSEKF LKAVLDVPFA FKRVDAMLYI ANFESEVKYL KNNFEILEAA CDELRNSRLF LKLLEAILKT
701: GNRMNVGTNR GDAHAFKLDT LLKLADVKGT DGKTTLLHFV VQEIIRTEGS RLSASNQSTP RTLANPLRDE LECKKLGLQV VAGLGNELSS VKKAAAMDSD
801: VLSSYVTKLA GGIEKITEVL RLNEELNTRD DAWRFHDTMQ KFLKKADDEI LRVQAQESVA LSLVKEITEY FHGDSAKEEA HPFRIFMVVR DFLSVLTEVC
901: REVGRINDRT IASSVRHFPV PVNPMMPQLF PRIHALRAGI SDDESSVASS P
Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.