Factsheet for TraesCS3B01G429900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G397900.1	Wheat	plasma membrane	97.59	98.1
HORVU3Hr1G089510.1	Barley	plasma membrane	96.86	97.16
TraesCS3D01G391800.1	Wheat	mitochondrion	93.08	93.28
Os01t0897700-01	Rice	cytosol	23.69	92.62
OQU88036	Sorghum	extracellular, plasma membrane	79.66	80.85
Zm00001d012158_P001	Maize	extracellular, plasma membrane	77.57	77.81
Zm00001d042506_P002	Maize	extracellular, plasma membrane	77.57	77.41
PGSC0003DMT400056393	Potato	cytosol	31.87	63.33
GSMUA_Achr5P25760_001	Banana	mitochondrion	27.88	60.59
VIT_00s0227g00200.t01	Wine grape	cytosol	9.64	60.13
AT3G25493.1	Thale cress	vacuole	8.6	51.25
VIT_05s0094g00920.t01	Wine grape	nucleus	49.79	51.08
KRH47952	Soybean	cytosol	39.83	48.97
Bra029655.1-P	Field mustard	cytosol	15.3	48.18
PGSC0003DMT400013717	Potato	plastid	42.35	46.92
Solyc12g019480.1.1	Tomato	nucleus	42.77	45.95
KRH71295	Soybean	vacuole	42.03	45.57
Bra012246.1-P	Field mustard	cytosol	9.33	45.41
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	35.64	45.03
Solyc06g082910.2.1	Tomato	extracellular	43.92	44.77
KRH50174	Soybean	vacuole	42.03	44.75
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	42.45	44.55
Solyc08g014430.2.1	Tomato	nucleus	35.12	44.25
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	43.71	44.17
Bra001256.1-P	Field mustard	plastid	17.51	43.83
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	35.85	43.46
CDX79799	Canola	mitochondrion, plastid, vacuole	35.12	42.19
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	47.06	41.61
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	37.21	41.42
CDX83457	Canola	golgi, plasma membrane, vacuole	36.58	41.4
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	45.49	41.29
CDY17909	Canola	golgi, vacuole	36.48	41.04
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.02	40.8
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.28	40.79
CDY44259	Canola	plasma membrane, vacuole	35.85	40.57
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.12	40.33
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	37.74	40.27
TraesCS4B01G257800.1	Wheat	plasma membrane	37.11	39.64
KRH00989	Soybean	extracellular, golgi, vacuole	42.98	39.46
KRH40232	Soybean	endoplasmic reticulum, extracellular	42.56	39.15
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	36.69	39.11
TraesCS2B01G213200.1	Wheat	plasma membrane	31.97	38.95
TraesCS1B01G059400.1	Wheat	plastid	22.43	38.01
TraesCS1B01G340800.1	Wheat	mitochondrion	31.03	35.49
AT5G48360.1	Thale cress	extracellular, vacuole	28.41	34.65
CDX86310	Canola	endoplasmic reticulum, plasma membrane	29.04	34.32
CDX85333	Canola	plasma membrane	29.56	34.26
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.93	34.2
CDY35941	Canola	plastid	26.73	34.05
CDY28040	Canola	plastid	27.15	33.64
CDX74041	Canola	golgi, plasma membrane, plastid	24.63	32.96
CDY07990	Canola	golgi, plasma membrane, plastid	24.21	31.99
AT3G07540.1	Thale cress	plasma membrane	27.04	30.68
TraesCS2B01G344200.1	Wheat	golgi	25.79	29.39
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	25.68	29.2
TraesCS2B01G239500.1	Wheat	plasma membrane	26.31	26.67
TraesCS6B01G163200.1	Wheat	plasma membrane	23.17	26.18
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	23.17	24.53
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	26.1	23.76
TraesCS2B01G209600.1	Wheat	cytosol	9.01	21.08
TraesCS2B01G406800.1	Wheat	cytosol	13.52	13.84
TraesCS1B01G094200.1	Wheat	cytosol	18.55	12.62
TraesCS6B01G389300.1	Wheat	cytosol	15.2	10.85
TraesCS4B01G236500.1	Wheat	mitochondrion	7.86	8.32
TraesCS2B01G209500.1	Wheat	cytosol	1.99	5.35
TraesCS7B01G051900.1	Wheat	mitochondrion	2.62	4.14

Protein Annotations

EnsemblPlants:TraesCS3B01G429900.1	EnsemblPlantsGene:TraesCS3B01G429900	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil
PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	PFAM:PF02181	PFscan:PS51444	PRINTS:PR01217	SEG:seg
SignalP:SignalP-noTM	SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix	MapMan:20.2.2.6.1	:

Description

No Description!

Coordinates

chr3B:+:669425192..669428380

Molecular Weight (calculated)

101584.0 Da

IEP (calculated)

10.008

GRAVY (calculated)

-0.423

Length

954 amino acids

Sequence
(BLAST)

001: MPSLRRPRRR GLPLPLLILL PILLASSRAV DGRAPAATAR RQLHQPFLPD PSSSSSAPPS QAPPGPAPPF FPTLQAPPPP PGTPTAPEQP TYPALVLPNP
101: STPAGSATAA PSDGAGAGSG GNKSSKSSKL VPAILLPLLT VAVLGLSIAF FFKRRRTNAG RGVGGGCVGG GDSKFLHPER ASLFARDEFG GSGRGAPATT
201: AASTAPSAEF LYVGTLAGRE DGKSSDTTSS GDEVSRSSGG SPELRPLPPL VGRQCGPAGS RSPGIGGSSP SSGDEEFYSP RGSSKASGSQ RTLAAAVQAA
301: VAARDRSRTP SPGSAVSTPS YPSSPGATMS PAPSSPPLLS SPGQSCRRSA KARSESARDV FGMPPTPPPP PPPFAPTLPP PPPPRRKPPS PSPPSSPLVS
401: TPPALRSATD TISKNPFTQP PAPPTSTRGQ PPPPPPPPPP PLGYWESRVR KPGMSKEAMS PALSPPPQAA NSRSVPPTDA FPGRLQDNAD HGDKSEETTP
501: RPKLKPLHWD KVRASSDRAM VWDQLKSSSF QVNEEMIETL FICNPANAAP KEATKRPALP TPKAENKVLL DPKKAQNIAI LLRALNVTKE EVCEALCEGN
601: TQNFGADLLE TLLKMAPTKE EEIKLREFKE ETSPIKLGPS EKFLKAVLDV PFAFKRVDAM LYIANFESEV KYLKNNFEIL EAACDELRNS RLFLKLLEAI
701: LKTGNRMNVG TNRGDAHAFK LDTLLKLADV KGTDGKTTLL HFVVQEIIRT EGSRLSASNQ STPRTLANPL RDELECKKLG LQVVAGLGNE LSSVKKAAAM
801: DSDVLSSYVA KLAGGIEKIT EVLRLNEELN TRDDAWRFHD TMQKFLKKAD DEILRVQAQE SVALSLVKEI TEYFHGDSAK EEAHPFRIFM VVRDFLSVLT
901: QVCREVGRIN DRTIASSVRH FPVPVNPMMP QLFPRIHALR AGISDDESSV ASSP

Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)

0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S

Arabidopsis Description

FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.