Factsheet for VIT_05s0094g00920.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0227g00200.t01	Wine grape	cytosol	12.15	73.86
GSMUA_Achr11P...	Banana	mitochondrion, plastid	33.01	71.4
Os01t0897700-01	Rice	cytosol	18.17	69.26
GSMUA_Achr6P18370_001	Banana	nucleus	41.18	68.03
GSMUA_Achr5P25760_001	Banana	mitochondrion	30.11	63.78
PGSC0003DMT400013717	Potato	plastid	52.04	56.21
Solyc12g019480.1.1	Tomato	nucleus	53.66	56.19
KRH71295	Soybean	vacuole	51.61	54.55
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	44.09	54.3
KRH50174	Soybean	vacuole	52.15	54.13
GSMUA_Achr10P...	Banana	plastid	46.56	53.92
Solyc08g014430.2.1	Tomato	nucleus	42.9	52.71
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	39.68	51.04
OQU88036	Sorghum	extracellular, plasma membrane	50.97	50.43
HORVU3Hr1G089510.1	Barley	plasma membrane	51.08	49.95
Zm00001d012158_P001	Maize	extracellular, plasma membrane	50.97	49.84
CDX83457	Canola	golgi, plasma membrane, vacuole	45.16	49.82
TraesCS3B01G429900.1	Wheat	plasma membrane	51.08	49.79
TraesCS3A01G397900.1	Wheat	plasma membrane	50.75	49.74
CDY44259	Canola	plasma membrane, vacuole	44.84	49.47
Zm00001d042506_P002	Maize	extracellular, plasma membrane	50.75	49.37
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	35.38	49.03
CDX79799	Canola	mitochondrion, plastid, vacuole	41.61	48.74
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	46.56	48.43
CDY17909	Canola	golgi, vacuole	43.55	47.76
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	43.76	47.49
TraesCS3D01G391800.1	Wheat	mitochondrion	48.6	47.48
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	45.38	47.15
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	43.55	45.71
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	38.49	45.49
TraesCS5A01G304700.1	Wheat	golgi	38.28	45.24
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	38.28	45.18
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	38.17	45.17
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	40.43	44.82
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	23.98	44.69
Zm00001d021173_P001	Maize	plasma membrane	36.34	44.36
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	37.96	41.53
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	37.2	41.09
TraesCS1D01G010200.1	Wheat	plastid	24.52	40.14
TraesCS1B01G059400.1	Wheat	plastid	23.66	39.08
GSMUA_Achr7P23740_001	Banana	plastid	49.89	38.7
TraesCS1A01G011800.1	Wheat	extracellular	21.4	37.34
HORVU1Hr1G002300.8	Barley	plastid	27.63	35.5
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	29.57	33.13
VIT_12s0059g02680.t01	Wine grape	golgi	27.53	31.96
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	27.96	30.99
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	26.67	30.28
VIT_14s0060g02330.t01	Wine grape	golgi, plasma membrane, vacuole	30.0	29.12
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	25.27	28.8
VIT_17s0000g07570.t01	Wine grape	nucleus	24.62	26.97
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	23.55	26.74
VIT_11s0016g00160.t01	Wine grape	cytosol	18.49	14.9
Zm00001d035757_P003	Maize	plasma membrane	26.67	14.74
VIT_02s0033g01360.t01	Wine grape	cytosol, nucleus, plasma membrane	18.6	13.24
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	17.96	12.57
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	16.34	10.33

Protein Annotations

Gene3D:1.20.58.2220	EntrezGene:100245626	wikigene:100245626	MapMan:20.2.2.6.1	ProteinID:CCB49402	ProteinID:CCB49402.1
ncoils:Coil	UniProt:F6HAX7	InterPro:FH2_Formin	EMBL:FN595507	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR015425	EntrezGene:LOC100245626	wikigene:LOC100245626	PFAM:PF02181	PFscan:PS51444
PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	SMART:SM00498	SUPFAM:SSF101447	TIGR:TC55249	TMHMM:TMhelix
UniParc:UPI00021095C2	ArrayExpress:VIT_05s0094g00920	EnsemblPlantsGene:VIT_05s0094g00920	EnsemblPlants:VIT_05s0094g00920.t01	unigene:Vvi.9717	RefSeq:XP_002275001
RefSeq:XP_002275001.1	SEG:seg	:	:	:	:

Description

Formin-like protein [Source:UniProtKB/TrEMBL;Acc:F6HAX7]

Coordinates

chr5:+:24256905..24266268

Molecular Weight (calculated)

101839.0 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.537

Length

930 amino acids

Sequence
(BLAST)

001: MSSTKGGRYQ KHEKYDQAAA ADYHLQTRRI LHQPLFPLNS FPPTPSPASS PQAHPQQQPK FPFSSSSSNK QPFFPAYASP PPPPSSTALA TFPANISSLI
101: FPQSSSRKGV SPKLVAIAVG VSLAAVALIA IAAVLLYHRR QPKRKDPRSD SLRLYPANTA VSDGIQHHKQ PRSSISGTSS EFLYLGTLVN SRGVDDDAAA
201: NSSNAGTKRS ASASPPYQKL SSPELRPLPP LPRQNFRHSF RNADVGSFGD DDEDEEFFSP RGSSSPVGAG SSSRRTFPMV EAENYRSRSV DSRTPSYPSS
301: NSASPTSSTS NSPSPPLNSS PEISKSKLPV SNSASPPLNS SPEVSKPKSP TATINFPAPP PLRPPPPLPR RSRTPSPPSE TEELGQRISD VSGGSPQKFE
401: AVSTEIPIAK PPPPPPPPPP PRFWEIPADP TPIHEPNFGP PALVPPSRPV VFQNPGLEAP SEQPQGIEAL ERNGETPKPK LKPLHWDKVR ASSDRAMVWD
501: QMKSSSFQLN EEMIETLFMV NASNLTPKDN LRRQILPTPN QENRVLDPKK SQNIAILLRA LNVTIDEVCE ALLEGNTDTL GTELLESLLK MAPTKEEECK
601: LKEFKDESPF KLGPAERFLR AVLDIPFAFK RVDAMLYIAN FDSEVEYLKR SFDTLEAACE ELRNSRMFLK LLEAVLKTGN RMNVGTNRGD AHAFKLDTLL
701: KLVDIKGTDG KTTLLHFVVQ EIIRAEGSRL AGANQKTMDE VTQQSAFRDD VEFRKLGLQV VAGLSGELTS VKKAAAMDSD VLSNEVAKLA RGITKIGEVA
801: RLNEEIALKE SSRKFCESMN GFLKKAEEEI IKIQAQESAA LTLVKEITEY FHGNSAKEEA HPFRIFMVVR DFLSILDQVC KEVGKINERT IVSSARQFPM
901: PLNPSTPPIF PGFNQRPQYG SSDDESSSSS

Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)

0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S

Arabidopsis Description

FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.